Initial commit

Reviewed-on: https://git.clan.lol/clan/clan-core/pulls/424

.gitignore

@@ -1,4 +1,7 @@
 .direnv
+.coverage.*
+**/qubeclan
+**/testdir
 democlan
 result*
 /pkgs/clan-cli/clan_cli/nixpkgs

clanModules/diskLayouts/singleDiskExt4.nix

@@ -1,44 +0,0 @@
-{ config, lib, ... }:
-{
-  options.clan.diskLayouts.singleDiskExt4 = {
-    device = lib.mkOption {
-      type = lib.types.str;
-      example = "/dev/disk/by-id/ata-Samsung_SSD_850_EVO_250GB_S21PNXAGB12345";
-    };
-  };
-  config.disko.devices = {
-    disk = {
-      main = {
-        type = "disk";
-        device = config.clan.diskLayouts.singleDiskExt4.device;
-        content = {
-          type = "gpt";
-          partitions = {
-            boot = {
-              size = "1M";
-              type = "EF02"; # for grub MBR
-            };
-            ESP = {
-              size = "512M";
-              type = "EF00";
-              content = {
-                type = "filesystem";
-                format = "vfat";
-                mountpoint = "/boot";
-              };
-            };
-            root = {
-              size = "100%";
-              content = {
-                type = "filesystem";
-                format = "ext4";
-                mountpoint = "/";
-              };
-            };
-          };
-        };
-      };
-    };
-  };
-}
-

clanModules/flake-module.nix

@@ -1,12 +0,0 @@
-{ self, lib, ... }: {
-  flake.clanModules = {
-    diskLayouts = lib.mapAttrs'
-      (name: _: lib.nameValuePair (lib.removeSuffix ".nix" name) {
-        imports = [
-          self.inputs.disko.nixosModules.disko
-          ./diskLayouts/${name}
-        ];
-      })
-      (builtins.readDir ./diskLayouts);
-  };
-}

docs/clan-config.md

@@ -1,69 +0,0 @@
-# cLAN config
-
-`clan config` allows you to manage your nixos configuration via the terminal.
-Similar as how `git config` reads and sets git options, `clan config` does the same with your nixos options
-It also supports auto completion making it easy to find the right options.
-
-## Set up clan-config
-
-Add the clan tool to your flake inputs:
-
-```
-clan.url = "git+https://git.clan.lol/clan/clan-core";
-```
-
-and inside the mkFlake:
-
-```
-imports = [
-  inputs.clan.flakeModules.clan-config
-];
-```
-
-Add an empty config file and add it to git
-
-```command
-echo "{}" > ./clan-settings.json
-git add ./clan-settings.json
-```
-
-Import the clan-config module into your nixos configuration:
-
-```nix
-{
-  imports = [
-    # clan-settings.json is located in the same directory as your flake.
-    # Adapt the path if necessary.
-    (builtins.fromJSON (builtins.readFile ./clan-settings.json))
-  ];
-}
-
-
-```
-
-Make sure your nixos configuration is set a default
-
-```nix
-{self, ...}: {
-  flake.nixosConfigurations.default = self.nixosConfigurations.my-machine;
-}
-```
-
-Use all inputs provided by the clan-config devShell in your own devShell:
-
-```nix
-{ ... }: {
-  perSystem = { pkgs, self', ... }: {
-    devShells.default = pkgs.mkShell {
-      inputsFrom = [ self'.devShells.clan-config ];
-      # ...
-    };
-  };
-}
-```
-
-re-load your dev-shell to make the clan tool available.
-
-```command
-clan config --help
-```

docs/quickstart.md

@@ -1,155 +0,0 @@
-# Initializing a New Clan Project
-
-## Create a new Clan flake
-
-1. To start a new project, execute the following command to add the clan cli to your shell:
-
-```shellSession
-$ nix shell git+https://git.clan.lol/clan/clan-core
-```
-
-2. Then use the following commands to initialize a new clan-flake:
-
-```shellSession
-$ mkdir ./my-flake
-$ cd ./my-flake
-$ clan create
-```
-
-This action will generate two primary files: `flake.nix` and `.clan-flake`.
-
-```shellSession
-$ ls -la
-drwx------ joerg users   5 B  a minute ago   ./
-drwxrwxrwt root  root  139 B  12 seconds ago ../
-.rw-r--r-- joerg users  77 B  a minute ago   .clan-flake
-.rw-r--r-- joerg users 4.8 KB a minute ago   flake.lock
-.rw-r--r-- joerg users 242 B  a minute ago   flake.nix
-```
-
-### Understanding the .clan-flake Marker File
-
-The `.clan-flake` marker file serves an optional purpose: it helps the `clan-cli` utility locate the project's root directory.
-If `.clan-flake` is missing, `clan-cli` will instead search for other indicators like `.git`, `.hg`, `.svn`, or `flake.nix` to identify the project root.
-
-## Add your first machine
-
-```shellSession
-$ clan machines create my-machine
-$ clan machines list
-my-machine
-```
-
-## Configure your machine
-
-In this example we crate a user named `my-user` that is allowed to login to the machine
-
-```shellSession
-# create a new user
-$ clan config --machine my-machine users.users.my-user.isNormalUser true
-
-# set some password
-$ clan config --machine my-machine users.users.my-user.hashedPassword $(mkpasswd)
-```
-
-## Test your machine config inside a VM
-
-```shellSession
-$ nix build .#nixosConfigurations.my-machine.config.system.build.vm
-...
-$ ./result/bin/run-nixos-vm
-```
-
----
-
-# Migrating Existing NixOS Configuration Flake
-
-Absolutely, let's break down the migration step by step, explaining each action in detail:
-
-#### Before You Begin
-
-1. **Backup Your Current Configuration**: Always start by making a backup of your current NixOS configuration to ensure you can revert if needed.
-
-   ```shellSession
-   $ cp -r /etc/nixos ~/nixos-backup
-   ```
-
-2. **Update Flake Inputs**: Add a new input for the `clan-core` dependency:
-
-   ```nix
-   inputs.clan-core = {
-     url = "git+https://git.clan.lol/clan/clan-core";
-     # Don't do this if your machines are on nixpkgs stable.
-     inputs.nixpkgs.follows = "nixpkgs";
-   };
-   ```
-
-   - `url`: Specifies the Git repository URL for Clan Core.
-   - `inputs.nixpkgs.follows`: Tells Nix to use the same `nixpkgs` input as your main input (in this case, it follows `nixpkgs`).
-
-3. **Update Outputs**: Then modify the `outputs` section of your `flake.nix` to adapt to Clan Core's new provisioning method. The key changes are as follows:
-
-   Add `clan-core` to the output
-
-   ```diff
-   -  outputs = { self, nixpkgs,  }:
-   +  outputs = { self, nixpkgs, clan-core }:
-   ```
-
-   Previous configuration:
-
-   ```nix
-   {
-       nixosConfigurations.example-desktop = nixpkgs.lib.nixosSystem {
-           system = "x86_64-linux";
-           modules = [
-               ./configuration.nix
-           ];
-           [...]
-       };
-   }
-   ```
-
-   After change:
-
-   ```nix
-   let clan = clan-core.lib.buildClan {
-       # this needs to point at the repository root
-       directory = self;
-       specialArgs = {};
-       machines = {
-           example-desktop = {
-               nixpkgs.hostPlatform = "x86_64-linux";
-               imports = [
-                   ./configuration.nix
-               ];
-           };
-       };
-   };
-   in { inherit (clan) nixosConfigurations clanInternals; }
-   ```
-
-   - `nixosConfigurations`: Defines NixOS configurations, using Clan Core’s `buildClan` function to manage the machines.
-   - Inside `machines`, a new machine configuration is defined (in this case, `example-desktop`).
-   - Inside `example-desktop` which is the target machine hostname, `nixpkgs.hostPlatform` specifies the host platform as `x86_64-linux`.
-   - `clanInternals`: Is required to enable evaluation of the secret generation/upload script on every architecture
-
-4. **Rebuild and Switch**: Rebuild your NixOS configuration using the updated flake:
-
-   ```shellSession
-   $ sudo nixos-rebuild switch --flake .
-   ```
-
-   - This command rebuilds and switches to the new configuration. Make sure to include the `--flake .` argument to use the current directory as the flake source.
-
-5. **Test Configuration**: Before rebooting, verify that your new configuration builds without errors or warnings.
-
-6. **Reboot**: If everything is fine, you can reboot your system to apply the changes:
-
-   ```shellSession
-   $ sudo reboot
-   ```
-
-7. **Verify**: After the reboot, confirm that your system is running with the new configuration, and all services and applications are functioning as expected.
-
-By following these steps, you've successfully migrated your NixOS Flake configuration to include the `clan-core` input and adapted the `outputs` section to work with Clan Core's new machine provisioning method.

docs/secrets-management.md

@@ -1,173 +0,0 @@
-# Managing Secrets with Clan
-
-Clan enables encryption of secrets within a Clan flake, ensuring secure sharing among users.
-This documentation will guide you through managing secrets with the Clan CLI,
-which utilizes the [sops](https://github.com/getsops/sops) format and
-integrates with [sops-nix](https://github.com/Mic92/sops-nix) on NixOS machines.
-
-## 1. Generating Keys and Creating Secrets
-
-To begin, generate a key pair:
-
-```shellSession
-$ clan secrets key generate
-```
-
-**Output**:
-
-```
-Public key: age1wkth7uhpkl555g40t8hjsysr20drq286netu8zptw50lmqz7j95sw2t3l7
-Generated age private key at '/home/joerg/.config/sops/age/keys.txt' for your user.
-Generated age private key at '/home/joerg/.config/sops/age/keys.txt' for your user. Please back it up on a secure location or you will lose access to your secrets.
-Also add your age public key to the repository with 'clan secrets users add youruser age1wkth7uhpkl555g40t8hjsysr20drq286netu8zptw50lmqz7j95sw2t3l7' (replace you
-user with your user name)
-```
-
-⚠️ **Important**: Backup the generated private key securely, or risk losing access to your secrets.
-
-Next, add your public key to the Clan flake repository:
-
-```shellSession
-$ clan secrets users add <your_username> <your_public_key>
-```
-
-Doing so creates this structure in your Clan flake:
-
-```
-sops/
-└── users/
-    └── <your_username>/
-        └── key.json
-```
-
-Now, to set your first secret:
-
-```shellSession
-$ clan secrets set mysecret
-Paste your secret:
-```
-
-Note: As you type your secret, keypresses won't be displayed. Press Enter to save the secret.
-
-Retrieve the stored secret:
-
-```shellSession
-$ clan secrets get mysecret
-```
-
-And list all secrets like this:
-
-```shellSession
-$ clan secrets list
-```
-
-Secrets in the repository follow this structure:
-
-```
-sops/
-├── secrets/
-│   └── <secret_name>/
-│       ├── secret
-│       └── users/
-│           └── <your_username>/
-```
-
-The content of the secret is stored encrypted inside the `secret` file under `mysecret`.
-By default, secrets are encrypted with your key to ensure readability.
-
-## 2. Adding Machine Keys
-
-New machines in Clan come with age keys stored in `./sops/machines/<machine_name>`. To list these machines:
-
-```shellSession
-$ clan secrets machines list
-```
-
-For existing machines, add their keys:
-
-```shellSession
-$ clan secrets machines add <machine_name> <age_key>
-```
-
-To fetch an age key from an SSH host key:
-
-```shellSession
-$ ssh-keyscan <domain_name> | nix shell nixpkgs#ssh-to-age -c ssh-to-age
-```
-
-## 3. Assigning Access
-
-By default, secrets are encrypted for your key. To specify which users and machines can access a secret:
-
-```shellSession
-$ clan secrets set --machine <machine1> --machine <machine2> --user <user1> --user <user2> <secret_name>
-```
-
-You can add machines/users to existing secrets without modifying the secret:
-
-```shellSession
-$ clan secrets machines add-secret <machine_name> <secret_name>
-```
-
-## 4. Utilizing Groups
-
-For convenience, Clan CLI allows group creation to simplify access management. Here's how:
-
-1. **Creating Groups**:
-
-   Assign users to a new group, e.g., `admins`:
-
-   ```shellSession
-   $ clan secrets groups add admins <username>
-   ```
-
-2. **Listing Groups**:
-
-   ```shellSession
-   $ clan secrets groups list
-   ```
-
-3. **Assigning Secrets to Groups**:
-
-   ```shellSession
-   $ clan secrets groups add-secret <group_name> <secret_name>
-   ```
-
-# NixOS integration
-
-A NixOS machine will automatically import all secrets that are encrypted for the
-current machine. At runtime it will use the host key to decrypt all secrets into
-a in-memory, non-persistent filesystem using
-[sops-nix](https://github.com/Mic92/sops-nix). In your nixos configuration you
-can get a path to secrets like this `config.sops.secrets.<name>.path`. Example:
-
-```nix
-{ config, ...}: {
-  sops.secrets.my-password.neededForUsers = true;
-
-  users.users.mic92 = {
-    isNormalUser = true;
-    passwordFile = config.sops.secrets.my-password.path;
-  };
-}
-```
-
-See the [readme](https://github.com/Mic92/sops-nix) of sops-nix for more
-examples.
-
-# Importing existing sops-based keys / sops-nix
-
-`clan secrets` stores each secrets in a single file, whereas [sops](https://github.com/Mic92/sops-nix)
-commonly allows to put all secrets in a yaml or json documents.
-
-If you already happend to use sops-nix, you can migrate by using the `clan secrets import-sops` command by importing these documents:
-
-```shellSession
-% clan secrets import-sops --prefix matchbox- --group admins --machine matchbox nixos/matchbox/secrets/secrets.yaml
-```
-
-This will create secrets for each secret found in `nixos/matchbox/secrets/secrets.yaml` in a ./sops folder of your repository.
-Each member of the group `admins` will be able
-
-Since our clan secret module will auto-import secrets that are encrypted for a particular nixos machine,
-you can now remove `sops.secrets.<secrets> = { };` unless you need to specify more options for the secret like owner/group of the secret file.

docs/use-cases/01-self-host.md

@@ -1,43 +0,0 @@
-# Self Hosting
-
-## General Description
-
-Self-hosting refers to the practice of hosting and maintaining servers, networks, storage, services, and other types of infrastructure by oneself rather than relying on a third-party vendor. This could involve running a server from a home or business location, or leasing a dedicated server at a data center.
-
-There are several reasons for choosing to self-host. These can include:
-
-1. Cost savings: Over time, self-hosting can be more cost-effective, especially for businesses with large scale needs.
-
-1. Control: Self-hosting provides a greater level of control over the infrastructure and services. It allows the owner to customize the system to their specific needs.
-
-1. Privacy and security: Self-hosting can offer improved privacy and security because data remains under the control of the host rather than being stored on third-party servers.
-
-1. Independent: Being independent of third-party services can ensure that one's websites, applications, or services remain up even if the third-party service goes down.
-
-## Stories
-
-### Story 1: Private mumble server hosted at home
-
-Alice wants to self-host a mumble server for her family.
-
-- She visits to the cLAN website, and follows the instructions on how to install cLAN-OS on her server.
-- Alice logs into a terminal on her server via SSH (alternatively uses cLAN GUI app)
-- Using the cLAN CLI or GUI tool, alice creates a new private network for her family (VPN)
-- Alice now browses a list of curated cLAN modules and finds a module for mumble.
-- She adds this module to her network using the cLAN tool.
-- After that, she uses the clan tool to invite her family members to her network
-- Other family members join the private network via the invitation.
-- By accepting the invitation, other members automatically install all required software to interact with the network on their machine.
-
-### Story 2: Adding a service to an existing network
-
-Alice wants to add a photos app to her private network
-
-- She uses the clan CLI or GUI tool to manage her existing private cLAN family network
-- She discovers a module for photoprism, and adds it to her server using the tool
-- Other members who are already part of her network, will receive a notification that an update is required to their environment
-- After accepting, all new software and services to interact with the new photoprism service will be installed automatically.
-
-## Challenges
-
-...

docs/use-cases/02-join-network.md

@@ -1,37 +0,0 @@
-# Joining a cLAN network
-
-## General Description
-
-Joining a self-hosted infrastructure involves connecting to a network, server, or system that is privately owned and managed, instead of being hosted by a third-party service provider. This could be a business's internal server, a private cloud setup, or any other private IT infrastructure that is not publicly accessible or controlled by outside entities.
-
-## Stories
-
-### Story 1: Joining a private network
-
-Alice' son Bob has never heard of cLAN, but receives an invitation URL from Alice who already set up private cLAN network for her family.
-
-Bob opens the invitation link and lands on the cLAN website. He quickly learns about what cLAN is and can see that the invitation is for a private network of his family that hosts a number of services, like a private voice chat and a photo sharing platform.
-
-Bob decides to join the network and follows the instructions to install the cLAN tool on his computer.
-
-Feeding the invitation link to the cLAN tool, bob registers his machine with the network.
-
-All programs required to interact with the network will be installed and configured automatically and securely.
-
-Optionally, bob can customize the configuration of these programs through a simplified configuration interface.
-
-### Story 2: Receiving breaking changes
-
-The cLAN family network which Bob is part of received an update.
-
-The existing photo sharing service has been removed and replaced with another alternative service. The new photo sharing service requires a different client app to view and upload photos.
-
-Bob accepts the update. Now his environment will be updated. The old client software will be removed and the new one installed.
-
-Because Bob has customized the previous photo viewing app, he is notified that this customization is no longer valid, as the software has been removed (deprecation message).l
-
-Optionally, Bob can now customize the new photo viewing software through his cLAN configuration app or via a config file.
-
-## Challenges
-
-...

docs/use-cases/03-maintaining-clan-modules.md

@@ -1,25 +0,0 @@
-# cLAN module maintaining
-
-## General Description
-
-cLAN modules are pieces of software that can be used by admins to build a private or public infrastructure.
-
-cLAN modules should have the following properties:
-
-1. Documented: It should be clear what the module does and how to use it.
-1. Self contained: A module should be usable as is. If it requires any other software or settings, those should be delivered with the module itself.
-1. Simple to deploy and use: Modules should have opinionated defaults that just work. Any customization should be optional
-
-## Stories
-
-### Story 1: Maintaining a shared folder module
-
-Alice maintains a module for a shared folder service that she uses in her own infra, but also publishes for the community.
-
-By following clan module standards (Backups, Interfaces, Output schema, etc), other community members have an easy time re-using the module within their own infra.
-
-She benefits from publishing the module, because other community members start using it and help to maintain it.
-
-## Challenges
-
-...

docs/use-cases/_template.md

@@ -1,17 +0,0 @@
-# (TITLE)
-
-## General Description
-
-## Stories
-
-### Story 1: Some Description
-
-Alice...
-
-### Story 2: Some Description
-
-Bob...
-
-## Challenges
-
-...

docs/zerotier.md

@@ -1,69 +0,0 @@
-# ZeroTier Configuration with NixOS in Clan
-
-This guide provides detailed instructions for configuring
-[ZeroTier VPN](https://zerotier.com) within Clan. Follow the
-outlined steps to set up a machine as a VPN controller (`<CONTROLLER>`) and to
-include a new machine into the VPN.
-
-## 1. Setting Up the VPN Controller
-
-The VPN controller is initially essential for providing configuration to new
-peers. Post the address allocation, the controller's continuous operation is not
-crucial.
-
-### Instructions:
-
-1. **Designate a Machine**: Label a machine as the VPN controller in the clan,
-   referred to as `<CONTROLLER>` henceforth in this guide.
-2. **Add Configuration**: Input the below configuration to the NixOS
-   configuration of the controller machine:
-   ```nix
-   clan.networking.zerotier.controller = {
-     enable = true;
-     public = true;
-   };
-   ```
-3. **Update the Controller Machine**: Execute the following:
-   ```console
-   $ clan machines update <CONTROLLER>
-   ```
-   Your machine is now operational as the VPN controller.
-
-## 2. Integrating a New Machine to the VPN
-
-To introduce a new machine to the VPN, adhere to the following steps:
-
-### Instructions:
-
-1. **Update Configuration**: On the new machine, incorporate the below to its
-   configuration, substituting `<CONTROLLER>` with the controller machine name:
-   ```nix
-   { config, ... }: {
-     clan.networking.zerotier.networkId = builtins.readFile (config.clanCore.clanDir + "/machines/<CONTROLLER>/facts/zerotier-network-id");
-   }
-   ```
-2. **Update the New Machine**: Execute:
-   ```console
-   $ clan machines update <NEW_MACHINE>
-   ```
-   Replace `<NEW_MACHINE>` with the designated new machine name.
-3. **Retrieve the ZeroTier ID**: On the `new_machine`, execute:
-   ```console
-   $ sudo zerotier-cli info
-   ```
-   Example Output: `200 info d2c71971db 1.12.1 OFFLINE`, where `d2c71971db` is
-   the ZeroTier ID.
-4. **Authorize the New Machine on Controller**: On the controller machine,
-   execute:
-   ```console
-   $ sudo zerotier-members allow <ID>
-   ```
-   Substitute `<ID>` with the ZeroTier ID obtained previously.
-5. **Verify Connection**: On the `new_machine`, re-execute:
-   ```console
-   $ sudo zerotier-cli info
-   ```
-   The status should now be "ONLINE" e.g., `200 info 47303517ef 1.12.1 ONLINE`.
-
-Congratulations! The new machine is now part of the VPN, and the ZeroTier
-configuration on NixOS within the Clan project is complete.

flake.lock

@@ -1,25 +1,5 @@
 {
   "nodes": {
-    "disko": {
-      "inputs": {
-        "nixpkgs": [
-          "nixpkgs"
-        ]
-      },
-      "locked": {
-        "lastModified": 1696266752,
-        "narHash": "sha256-wJnMDFM21+xXdsXSs6pXMElbv4YfqmQslcPApRuaYKs=",
-        "owner": "nix-community",
-        "repo": "disko",
-        "rev": "646ee25c25fffee122a66282861f5f56ad3e0fd9",
-        "type": "github"
-      },
-      "original": {
-        "owner": "nix-community",
-        "repo": "disko",
-        "type": "github"
-      }
-    },
     "flake-parts": {
       "inputs": {
         "nixpkgs-lib": [
@@ -27,11 +7,11 @@
         ]
       },
       "locked": {
-        "lastModified": 1693611461,
-        "narHash": "sha256-aPODl8vAgGQ0ZYFIRisxYG5MOGSkIczvu2Cd8Gb9+1Y=",
+        "lastModified": 1696343447,
+        "narHash": "sha256-B2xAZKLkkeRFG5XcHHSXXcP7To9Xzr59KXeZiRf4vdQ=",
         "owner": "hercules-ci",
         "repo": "flake-parts",
-        "rev": "7f53fdb7bdc5bb237da7fefef12d099e4fd611ca",
+        "rev": "c9afaba3dfa4085dbd2ccb38dfade5141e33d9d4",
         "type": "github"
       },
       "original": {
@@ -60,90 +40,30 @@
         "type": "github"
       }
     },
-    "nixlib": {
-      "locked": {
-        "lastModified": 1693701915,
-        "narHash": "sha256-waHPLdDYUOHSEtMKKabcKIMhlUOHPOOPQ9UyFeEoovs=",
-        "owner": "nix-community",
-        "repo": "nixpkgs.lib",
-        "rev": "f5af57d3ef9947a70ac86e42695231ac1ad00c25",
-        "type": "github"
-      },
-      "original": {
-        "owner": "nix-community",
-        "repo": "nixpkgs.lib",
-        "type": "github"
-      }
-    },
-    "nixos-generators": {
-      "inputs": {
-        "nixlib": "nixlib",
-        "nixpkgs": [
-          "nixpkgs"
-        ]
-      },
-      "locked": {
-        "lastModified": 1693791338,
-        "narHash": "sha256-wHmtB5H8AJTUaeGHw+0hsQ6nU4VyvVrP2P4NeCocRzY=",
-        "owner": "nix-community",
-        "repo": "nixos-generators",
-        "rev": "8ee78470029e641cddbd8721496da1316b47d3b4",
-        "type": "github"
-      },
-      "original": {
-        "owner": "nix-community",
-        "repo": "nixos-generators",
-        "type": "github"
-      }
-    },
     "nixpkgs": {
       "locked": {
-        "lastModified": 1695741452,
-        "narHash": "sha256-pDIQmCR0fyb6FKjvURaD6yC5YnE/+rxs5iFQQGgcoNE=",
-        "owner": "Mic92",
+        "lastModified": 1697059129,
+        "narHash": "sha256-9NJcFF9CEYPvHJ5ckE8kvINvI84SZZ87PvqMbH6pro0=",
+        "owner": "nixos",
         "repo": "nixpkgs",
-        "rev": "bc160df717ed1e9defe6044092ea66950976e3ed",
+        "rev": "5e4c2ada4fcd54b99d56d7bd62f384511a7e2593",
         "type": "github"
       },
       "original": {
-        "owner": "Mic92",
-        "ref": "fakeroot",
+        "owner": "nixos",
+        "ref": "nixos-unstable",
         "repo": "nixpkgs",
         "type": "github"
       }
     },
     "root": {
       "inputs": {
-        "disko": "disko",
         "flake-parts": "flake-parts",
         "floco": "floco",
-        "nixos-generators": "nixos-generators",
         "nixpkgs": "nixpkgs",
-        "sops-nix": "sops-nix",
         "treefmt-nix": "treefmt-nix"
       }
     },
-    "sops-nix": {
-      "inputs": {
-        "nixpkgs": [
-          "sops-nix"
-        ],
-        "nixpkgs-stable": []
-      },
-      "locked": {
-        "lastModified": 1695284550,
-        "narHash": "sha256-z9fz/wz9qo9XePEvdduf+sBNeoI9QG8NJKl5ssA8Xl4=",
-        "owner": "Mic92",
-        "repo": "sops-nix",
-        "rev": "2f375ed8702b0d8ee2430885059d5e7975e38f78",
-        "type": "github"
-      },
-      "original": {
-        "owner": "Mic92",
-        "repo": "sops-nix",
-        "type": "github"
-      }
-    },
     "treefmt-nix": {
       "inputs": {
         "nixpkgs": [
@@ -151,11 +71,11 @@
         ]
       },
       "locked": {
-        "lastModified": 1695290086,
-        "narHash": "sha256-ol6licpIAzc9oMsEai/9YZhgSMcrnlnD/3ulMLGNKL0=",
+        "lastModified": 1695822946,
+        "narHash": "sha256-IQU3fYo0H+oGlqX5YrgZU3VRhbt2Oqe6KmslQKUO4II=",
         "owner": "numtide",
         "repo": "treefmt-nix",
-        "rev": "e951529be2e7c669487de78f5aef8597bbae5fca",
+        "rev": "720bd006d855b08e60664e4683ccddb7a9ff614a",
         "type": "github"
       },
       "original": {

flake.nix

@@ -1,22 +1,12 @@
 {
-  description = "clan.lol base operating system";
-
-  nixConfig.extra-substituters = [ "https://cache.clan.lol" ];
-  nixConfig.extra-trusted-public-keys = [ "cache.clan.lol-1:3KztgSAB5R1M+Dz7vzkBGzXdodizbgLXGXKXlcQLA28=" ];
+  description = "Consulting Website";
 
   inputs = {
     #nixpkgs.url = "github:NixOS/nixpkgs/nixos-unstable";
     # https://github.com/NixOS/nixpkgs/pull/257462
-    nixpkgs.url = "github:Mic92/nixpkgs/fakeroot";
+    nixpkgs.url = "github:nixos/nixpkgs/nixos-unstable";
     floco.url = "github:aakropotkin/floco";
     floco.inputs.nixpkgs.follows = "nixpkgs";
-    disko.url = "github:nix-community/disko";
-    disko.inputs.nixpkgs.follows = "nixpkgs";
-    sops-nix.url = "github:Mic92/sops-nix";
-    sops-nix.inputs.nixpkgs.follows = "sops-nix";
-    sops-nix.inputs.nixpkgs-stable.follows = "";
-    nixos-generators.url = "github:nix-community/nixos-generators";
-    nixos-generators.inputs.nixpkgs.follows = "nixpkgs";
     flake-parts.url = "github:hercules-ci/flake-parts";
     flake-parts.inputs.nixpkgs-lib.follows = "nixpkgs";
     treefmt-nix.url = "github:numtide/treefmt-nix";
@@ -34,14 +24,7 @@
         ./checks/flake-module.nix
         ./devShell.nix
         ./formatter.nix
-        ./templates/flake-module.nix
-        ./clanModules/flake-module.nix
-
         ./pkgs/flake-module.nix
-
-        ./lib/flake-module.nix
-        ./nixosModules/flake-module.nix
-        ./nixosModules/clanCore/flake-module.nix
       ];
     });
 }

formatter.nix

@@ -11,9 +11,10 @@
     treefmt.flakeFormatter = true;
     treefmt.programs.shellcheck.enable = true;
     treefmt.programs.prettier.enable = true;
-    treefmt.programs.prettier.settings.plugins = [
-      "${self'.packages.prettier-plugin-tailwindcss}/lib/node_modules/prettier-plugin-tailwindcss/dist/index.mjs"
-    ];
+    # TODO: add custom prettier package, that uses our ui/node_modules
+    # treefmt.programs.prettier.settings.plugins = [
+    #   "${self'.packages.prettier-plugin-tailwindcss}/lib/node_modules/prettier-plugin-tailwindcss/dist/index.mjs"
+    # ];
     treefmt.settings.formatter.prettier.excludes = [
       "secrets.yaml"
       "key.json"

lib/build-clan/default.nix

@@ -1,59 +0,0 @@
-{ nixpkgs, self, lib }:
-{ directory  # The directory containing the machines subdirectory
-, specialArgs ? { } # Extra arguments to pass to nixosSystem i.e. useful to make self available
-, machines ? { } # allows to include machine-specific modules i.e. machines.${name} = { ... }
-}:
-let
-  machinesDirs = lib.optionalAttrs (builtins.pathExists "${directory}/machines") (builtins.readDir (directory + /machines));
-
-  machineSettings = machineName:
-    lib.optionalAttrs (builtins.pathExists "${directory}/machines/${machineName}/settings.json")
-      (builtins.fromJSON
-        (builtins.readFile (directory + /machines/${machineName}/settings.json)));
-
-  # TODO: remove default system once we have a hardware-config mechanism
-  nixosConfiguration = { system ? "x86_64-linux", name }: nixpkgs.lib.nixosSystem {
-    modules = [
-      self.nixosModules.clanCore
-      (machineSettings name)
-      (machines.${name} or { })
-      {
-        clanCore.machineName = name;
-        clanCore.clanDir = directory;
-        nixpkgs.hostPlatform = lib.mkForce system;
-      }
-    ];
-    inherit specialArgs;
-  };
-
-  allMachines = machinesDirs // machines;
-
-  supportedSystems = [
-    "x86_64-linux"
-    "aarch64-linux"
-    "riscv64-linux"
-    "x86_64-darwin"
-    "aarch64-darwin"
-  ];
-
-  nixosConfigurations = lib.mapAttrs (name: _: nixosConfiguration { inherit name; }) allMachines;
-
-  # This instantiates nixos for each system that we support:
-  # configPerSystem = <system>.<machine>.nixosConfiguration
-  # We need this to build nixos secret generators for each system
-  configsPerSystem = builtins.listToAttrs
-    (builtins.map
-      (system: lib.nameValuePair system
-        (lib.mapAttrs (name: _: nixosConfiguration { inherit name system; }) allMachines))
-      supportedSystems);
-in
-{
-  inherit nixosConfigurations;
-
-  clanInternals = {
-    machines = configsPerSystem;
-    all-machines-json = lib.mapAttrs
-      (system: configs: nixpkgs.legacyPackages.${system}.writers.writeJSON "machines.json" (lib.mapAttrs (_: m: m.config.system.clan.deployment.data) configs))
-      configsPerSystem;
-  };
-}

lib/default.nix

@@ -1,6 +0,0 @@
-{ lib, self, nixpkgs, ... }:
-{
-  jsonschema = import ./jsonschema { inherit lib; };
-
-  buildClan = import ./build-clan { inherit lib self nixpkgs; };
-}

lib/flake-module.nix

@@ -1,14 +0,0 @@
-{ lib
-, inputs
-, self
-, ...
-}: {
-  imports = [
-    ./jsonschema/flake-module.nix
-  ];
-  flake.lib = import ./default.nix {
-    inherit lib;
-    inherit self;
-    inherit (inputs) nixpkgs;
-  };
-}

lib/jsonschema/default.nix

@@ -1,167 +0,0 @@
-{ lib ? import <nixpkgs/lib> }:
-let
-
-  # from nixos type to jsonschema type
-  typeMap = {
-    bool = "boolean";
-    float = "number";
-    int = "integer";
-    str = "string";
-    path = "string"; # TODO add prober path checks
-  };
-
-  # remove _module attribute from options
-  clean = opts: builtins.removeAttrs opts [ "_module" ];
-
-  # throw error if option type is not supported
-  notSupported = option: throw
-    "option type '${option.type.name}' ('${option.type.description}') not supported by jsonschema converter";
-
-in
-rec {
-
-  # parses a nixos module to a jsonschema
-  parseModule = module:
-    let
-      evaled = lib.evalModules {
-        modules = [ module ];
-      };
-    in
-    parseOptions evaled.options;
-
-  # parses a set of evaluated nixos options to a jsonschema
-  parseOptions = options':
-    let
-      options = clean options';
-      # parse options to jsonschema properties
-      properties = lib.mapAttrs (_name: option: parseOption option) options;
-      isRequired = prop: ! (prop ? default || prop.type == "object");
-      requiredProps = lib.filterAttrs (_: prop: isRequired prop) properties;
-      required = lib.optionalAttrs (requiredProps != { }) {
-        required = lib.attrNames requiredProps;
-      };
-    in
-    # return jsonschema
-    required // {
-      type = "object";
-      inherit properties;
-    };
-
-  # parses and evaluated nixos option to a jsonschema property definition
-  parseOption = option:
-    let
-      default = lib.optionalAttrs (option ? default) {
-        inherit (option) default;
-      };
-      description = lib.optionalAttrs (option ? description) {
-        inherit (option) description;
-      };
-    in
-
-    # handle nested options (not a submodule)
-    if ! option ? _type
-    then parseOptions option
-
-    # throw if not an option
-    else if option._type != "option"
-    then throw "parseOption: not an option"
-
-    # parse nullOr
-    else if option.type.name == "nullOr"
-    # return jsonschema property definition for nullOr
-    then default // description // {
-      type = [
-        "null"
-        (typeMap.${option.type.functor.wrapped.name} or (notSupported option))
-      ];
-    }
-
-    # parse bool
-    else if option.type.name == "bool"
-    # return jsonschema property definition for bool
-    then default // description // {
-      type = "boolean";
-    }
-
-    # parse float
-    else if option.type.name == "float"
-    # return jsonschema property definition for float
-    then default // description // {
-      type = "number";
-    }
-
-    # parse int
-    else if (option.type.name == "int" || option.type.name == "positiveInt")
-    # return jsonschema property definition for int
-    then default // description // {
-      type = "integer";
-    }
-
-    # parse string
-    else if option.type.name == "str"
-    # return jsonschema property definition for string
-    then default // description // {
-      type = "string";
-    }
-
-    # parse string
-    else if option.type.name == "path"
-    # return jsonschema property definition for path
-    then default // description // {
-      type = "string";
-    }
-
-    # parse enum
-    else if option.type.name == "enum"
-    # return jsonschema property definition for enum
-    then default // description // {
-      enum = option.type.functor.payload;
-    }
-
-    # parse listOf submodule
-    else if option.type.name == "listOf" && option.type.functor.wrapped.name == "submodule"
-    # return jsonschema property definition for listOf submodule
-    then default // description // {
-      type = "array";
-      items = parseOptions (option.type.functor.wrapped.getSubOptions option.loc);
-    }
-
-    # parse list
-    else if
-      (option.type.name == "listOf")
-      && (typeMap ? "${option.type.functor.wrapped.name}")
-    # return jsonschema property definition for list
-    then default // description // {
-      type = "array";
-      items = {
-        type = typeMap.${option.type.functor.wrapped.name};
-      };
-    }
-
-    # parse attrsOf submodule
-    else if option.type.name == "attrsOf" && option.type.nestedTypes.elemType.name == "submodule"
-    # return jsonschema property definition for attrsOf submodule
-    then default // description // {
-      type = "object";
-      additionalProperties = parseOptions (option.type.nestedTypes.elemType.getSubOptions option.loc);
-    }
-
-    # parse attrs
-    else if option.type.name == "attrsOf"
-    # return jsonschema property definition for attrs
-    then default // description // {
-      type = "object";
-      additionalProperties = {
-        type = typeMap.${option.type.nestedTypes.elemType.name} or (notSupported option);
-      };
-    }
-
-    # parse submodule
-    else if option.type.name == "submodule"
-    # return jsonschema property definition for submodule
-    # then (lib.attrNames (option.type.getSubOptions option.loc).opt)
-    then parseOptions (option.type.getSubOptions option.loc)
-
-    # throw error if option type is not supported
-    else notSupported option;
-}

lib/jsonschema/example-data.json

@@ -1,14 +0,0 @@
-{
-  "name": "John Doe",
-  "age": 42,
-  "isAdmin": false,
-  "kernelModules": ["usbhid", "usb_storage"],
-  "userIds": {
-    "mic92": 1,
-    "lassulus": 2,
-    "davhau": 3
-  },
-  "services": {
-    "opt": "this option doesn't make sense"
-  }
-}

lib/jsonschema/example-interface.nix

@@ -1,51 +0,0 @@
-/*
-  An example nixos module declaring an interface.
-*/
-{ lib, ... }: {
-  options = {
-    # str
-    name = lib.mkOption {
-      type = lib.types.str;
-      default = "John Doe";
-      description = "The name of the user";
-    };
-    # int
-    age = lib.mkOption {
-      type = lib.types.int;
-      default = 42;
-      description = "The age of the user";
-    };
-    # bool
-    isAdmin = lib.mkOption {
-      type = lib.types.bool;
-      default = false;
-      description = "Is the user an admin?";
-    };
-    # a submodule option
-    services = lib.mkOption {
-      type = lib.types.submodule {
-        options.opt = lib.mkOption {
-          type = lib.types.str;
-          default = "foo";
-          description = "A submodule option";
-        };
-      };
-    };
-    # attrs of int
-    userIds = lib.mkOption {
-      type = lib.types.attrsOf lib.types.int;
-      description = "Some attributes";
-      default = {
-        horst = 1;
-        peter = 2;
-        albrecht = 3;
-      };
-    };
-    # list of str
-    kernelModules = lib.mkOption {
-      type = lib.types.listOf lib.types.str;
-      default = [ "nvme" "xhci_pci" "ahci" ];
-      description = "A list of enabled kernel modules";
-    };
-  };
-}

lib/jsonschema/example-schema.json

@@ -1,50 +0,0 @@
-{
-  "type": "object",
-  "properties": {
-    "name": {
-      "type": "string",
-      "default": "John Doe",
-      "description": "The name of the user"
-    },
-    "age": {
-      "type": "integer",
-      "default": 42,
-      "description": "The age of the user"
-    },
-    "isAdmin": {
-      "type": "boolean",
-      "default": false,
-      "description": "Is the user an admin?"
-    },
-    "kernelModules": {
-      "type": "array",
-      "items": {
-        "type": "string"
-      },
-      "default": ["nvme", "xhci_pci", "ahci"],
-      "description": "A list of enabled kernel modules"
-    },
-    "userIds": {
-      "type": "object",
-      "default": {
-        "horst": 1,
-        "peter": 2,
-        "albrecht": 3
-      },
-      "additionalProperties": {
-        "type": "integer"
-      },
-      "description": "Some attributes"
-    },
-    "services": {
-      "type": "object",
-      "properties": {
-        "opt": {
-          "type": "string",
-          "default": "foo",
-          "description": "A submodule option"
-        }
-      }
-    }
-  }
-}

lib/jsonschema/flake-module.nix

@@ -1,29 +0,0 @@
-{
-  perSystem = { pkgs, self', ... }: {
-    checks = {
-
-      # check if the `clan config` example jsonschema and data is valid
-      lib-jsonschema-example-valid = pkgs.runCommand "lib-jsonschema-example-valid" { } ''
-        echo "Checking that example-schema.json is valid"
-        ${pkgs.check-jsonschema}/bin/check-jsonschema \
-          --check-metaschema ${./.}/example-schema.json
-
-        echo "Checking that example-data.json is valid according to example-schema.json"
-        ${pkgs.check-jsonschema}/bin/check-jsonschema \
-          --schemafile ${./.}/example-schema.json \
-          ${./.}/example-data.json
-
-        touch $out
-      '';
-
-      # check if the `clan config` nix jsonschema converter unit tests succeed
-      lib-jsonschema-nix-unit-tests = pkgs.runCommand "lib-jsonschema-nix-unit-tests" { } ''
-        export NIX_PATH=nixpkgs=${pkgs.path}
-        ${self'.packages.nix-unit}/bin/nix-unit \
-          ${./.}/test.nix \
-          --eval-store $(realpath .)
-        touch $out
-      '';
-    };
-  };
-}

lib/jsonschema/gen-options-json.sh

@@ -1,6 +0,0 @@
-#!/usr/bin/env bash
-set -euo pipefail
-
-expr='let pkgs = import <nixpkgs> {}; lib = pkgs.lib; in (pkgs.nixosOptionsDoc {options = (lib.evalModules {modules=[./example-interface.nix];}).options;}).optionsJSON.options'
-
-jq < "$(nix eval --impure --raw --expr "$expr")" > options.json

lib/jsonschema/options.json

@@ -1,89 +0,0 @@
-{
-  "age": {
-    "declarations": [
-      "/home/grmpf/synced/projects/clan/clan-core/lib/jsonschema/example-interface.nix"
-    ],
-    "default": {
-      "_type": "literalExpression",
-      "text": "42"
-    },
-    "description": "The age of the user",
-    "loc": ["age"],
-    "readOnly": false,
-    "type": "signed integer"
-  },
-  "isAdmin": {
-    "declarations": [
-      "/home/grmpf/synced/projects/clan/clan-core/lib/jsonschema/example-interface.nix"
-    ],
-    "default": {
-      "_type": "literalExpression",
-      "text": "false"
-    },
-    "description": "Is the user an admin?",
-    "loc": ["isAdmin"],
-    "readOnly": false,
-    "type": "boolean"
-  },
-  "kernelModules": {
-    "declarations": [
-      "/home/grmpf/synced/projects/clan/clan-core/lib/jsonschema/example-interface.nix"
-    ],
-    "default": {
-      "_type": "literalExpression",
-      "text": "[\n  \"nvme\"\n  \"xhci_pci\"\n  \"ahci\"\n]"
-    },
-    "description": "A list of enabled kernel modules",
-    "loc": ["kernelModules"],
-    "readOnly": false,
-    "type": "list of string"
-  },
-  "name": {
-    "declarations": [
-      "/home/grmpf/synced/projects/clan/clan-core/lib/jsonschema/example-interface.nix"
-    ],
-    "default": {
-      "_type": "literalExpression",
-      "text": "\"John Doe\""
-    },
-    "description": "The name of the user",
-    "loc": ["name"],
-    "readOnly": false,
-    "type": "string"
-  },
-  "services": {
-    "declarations": [
-      "/home/grmpf/synced/projects/clan/clan-core/lib/jsonschema/example-interface.nix"
-    ],
-    "description": null,
-    "loc": ["services"],
-    "readOnly": false,
-    "type": "submodule"
-  },
-  "services.opt": {
-    "declarations": [
-      "/home/grmpf/synced/projects/clan/clan-core/lib/jsonschema/example-interface.nix"
-    ],
-    "default": {
-      "_type": "literalExpression",
-      "text": "\"foo\""
-    },
-    "description": "A submodule option",
-    "loc": ["services", "opt"],
-    "readOnly": false,
-    "type": "string"
-  },
-  "userIds": {
-    "declarations": [
-      "/home/grmpf/synced/projects/clan/clan-core/lib/jsonschema/example-interface.nix"
-    ],
-    "default": {
-      "_type": "literalExpression",
-      "text": "{\n  albrecht = 3;\n  horst = 1;\n  peter = 2;\n}"
-    },
-    "description": "Some attributes",
-    "loc": ["userIds"],
-    "readOnly": false,
-    "type": "attribute set of signed integer"
-  }
-}

lib/jsonschema/test.nix

@@ -1,8 +0,0 @@
-# run these tests via `nix-unit ./test.nix`
-{ lib ? (import <nixpkgs> { }).lib
-, slib ? import ./. { inherit lib; }
-}:
-{
-  parseOption = import ./test_parseOption.nix { inherit lib slib; };
-  parseOptions = import ./test_parseOptions.nix { inherit lib slib; };
-}

lib/jsonschema/test_parseOption.nix

@@ -1,249 +0,0 @@
-# tests for the nixos options to jsonschema converter
-# run these tests via `nix-unit ./test.nix`
-{ lib ? (import <nixpkgs> { }).lib
-, slib ? import ./. { inherit lib; }
-}:
-let
-  description = "Test Description";
-
-  evalType = type: default:
-    let
-      evaledConfig = lib.evalModules {
-        modules = [{
-          options.opt = lib.mkOption {
-            inherit type;
-            inherit default;
-            inherit description;
-          };
-        }];
-      };
-    in
-    evaledConfig.options.opt;
-in
-
-{
-  testNoDefaultNoDescription =
-    let
-      evaledConfig = lib.evalModules {
-        modules = [{
-          options.opt = lib.mkOption {
-            type = lib.types.bool;
-          };
-        }];
-      };
-    in
-    {
-      expr = slib.parseOption evaledConfig.options.opt;
-      expected = {
-        type = "boolean";
-      };
-    };
-
-  testBool =
-    let
-      default = false;
-    in
-    {
-      expr = slib.parseOption (evalType lib.types.bool default);
-      expected = {
-        type = "boolean";
-        inherit default description;
-      };
-    };
-
-  testString =
-    let
-      default = "hello";
-    in
-    {
-      expr = slib.parseOption (evalType lib.types.str default);
-      expected = {
-        type = "string";
-        inherit default description;
-      };
-    };
-
-  testInteger =
-    let
-      default = 42;
-    in
-    {
-      expr = slib.parseOption (evalType lib.types.int default);
-      expected = {
-        type = "integer";
-        inherit default description;
-      };
-    };
-
-  testFloat =
-    let
-      default = 42.42;
-    in
-    {
-      expr = slib.parseOption (evalType lib.types.float default);
-      expected = {
-        type = "number";
-        inherit default description;
-      };
-    };
-
-  testEnum =
-    let
-      default = "foo";
-      values = [ "foo" "bar" "baz" ];
-    in
-    {
-      expr = slib.parseOption (evalType (lib.types.enum values) default);
-      expected = {
-        enum = values;
-        inherit default description;
-      };
-    };
-
-  testListOfInt =
-    let
-      default = [ 1 2 3 ];
-    in
-    {
-      expr = slib.parseOption (evalType (lib.types.listOf lib.types.int) default);
-      expected = {
-        type = "array";
-        items = {
-          type = "integer";
-        };
-        inherit default description;
-      };
-    };
-
-  testAttrsOfInt =
-    let
-      default = { foo = 1; bar = 2; baz = 3; };
-    in
-    {
-      expr = slib.parseOption (evalType (lib.types.attrsOf lib.types.int) default);
-      expected = {
-        type = "object";
-        additionalProperties = {
-          type = "integer";
-        };
-        inherit default description;
-      };
-    };
-
-  testNullOrBool =
-    let
-      default = null; # null is a valid value for this type
-    in
-    {
-      expr = slib.parseOption (evalType (lib.types.nullOr lib.types.bool) default);
-      expected = {
-        type = [ "null" "boolean" ];
-        inherit default description;
-      };
-    };
-
-  testSubmoduleOption =
-    let
-      subModule = {
-        options.opt = lib.mkOption {
-          type = lib.types.bool;
-          default = true;
-          inherit description;
-        };
-      };
-    in
-    {
-      expr = slib.parseOption (evalType (lib.types.submodule subModule) { });
-      expected = {
-        type = "object";
-        properties = {
-          opt = {
-            type = "boolean";
-            default = true;
-            inherit description;
-          };
-        };
-      };
-    };
-
-  testSubmoduleOptionWithoutDefault =
-    let
-      subModule = {
-        options.opt = lib.mkOption {
-          type = lib.types.bool;
-          inherit description;
-        };
-      };
-    in
-    {
-      expr = slib.parseOption (evalType (lib.types.submodule subModule) { });
-      expected = {
-        type = "object";
-        properties = {
-          opt = {
-            type = "boolean";
-            inherit description;
-          };
-        };
-        required = [ "opt" ];
-      };
-    };
-
-  testAttrsOfSubmodule =
-    let
-      subModule = {
-        options.opt = lib.mkOption {
-          type = lib.types.bool;
-          default = true;
-          inherit description;
-        };
-      };
-      default = { foo.opt = false; bar.opt = true; };
-    in
-    {
-      expr = slib.parseOption (evalType (lib.types.attrsOf (lib.types.submodule subModule)) default);
-      expected = {
-        type = "object";
-        additionalProperties = {
-          type = "object";
-          properties = {
-            opt = {
-              type = "boolean";
-              default = true;
-              inherit description;
-            };
-          };
-        };
-        inherit default description;
-      };
-    };
-
-  testListOfSubmodule =
-    let
-      subModule = {
-        options.opt = lib.mkOption {
-          type = lib.types.bool;
-          default = true;
-          inherit description;
-        };
-      };
-      default = [{ opt = false; } { opt = true; }];
-    in
-    {
-      expr = slib.parseOption (evalType (lib.types.listOf (lib.types.submodule subModule)) default);
-      expected = {
-        type = "array";
-        items = {
-          type = "object";
-          properties = {
-            opt = {
-              type = "boolean";
-              default = true;
-              inherit description;
-            };
-          };
-        };
-        inherit default description;
-      };
-    };
-}

lib/jsonschema/test_parseOptions.nix

@@ -1,46 +0,0 @@
-# tests for the nixos options to jsonschema converter
-# run these tests via `nix-unit ./test.nix`
-{ lib ? (import <nixpkgs> { }).lib
-, slib ? import ./. { inherit lib; }
-}:
-let
-  evaledOptions =
-    let
-      evaledConfig = lib.evalModules {
-        modules = [ ./example-interface.nix ];
-      };
-    in
-    evaledConfig.options;
-in
-{
-  testParseOptions = {
-    expr = slib.parseOptions evaledOptions;
-    expected = builtins.fromJSON (builtins.readFile ./example-schema.json);
-  };
-
-  testParseNestedOptions =
-    let
-      evaled = lib.evalModules {
-        modules = [{
-          options.foo.bar = lib.mkOption {
-            type = lib.types.bool;
-          };
-        }];
-      };
-    in
-    {
-      expr = slib.parseOptions evaled.options;
-      expected = {
-        properties = {
-          foo = {
-            properties = {
-              bar = { type = "boolean"; };
-            };
-            required = [ "bar" ];
-            type = "object";
-          };
-        };
-        type = "object";
-      };
-    };
-}

nixosModules/clanCore/bloatware/default.nix

@@ -1,9 +0,0 @@
-{ lib, ... }: {
-  options.clan.bloatware = lib.mkOption {
-    type = lib.types.submodule {
-      imports = [
-        ../../../lib/jsonschema/example-interface.nix
-      ];
-    };
-  };
-}

nixosModules/clanCore/flake-module.nix

@@ -1,106 +0,0 @@
-{ self, inputs, lib, ... }: {
-  flake.nixosModules.clanCore = { config, pkgs, options, ... }: {
-    imports = [
-      ./secrets
-      ./zerotier
-      ./networking.nix
-      inputs.sops-nix.nixosModules.sops
-      # just some example options. Can be removed later
-      ./bloatware
-      ./vm.nix
-      ./options.nix
-    ];
-    options.clanSchema = lib.mkOption {
-      type = lib.types.attrs;
-      description = "The json schema for the .clan options namespace";
-      default = self.lib.jsonschema.parseOptions options.clan;
-    };
-    options.clanCore = {
-      clanDir = lib.mkOption {
-        type = lib.types.either lib.types.path lib.types.str;
-        description = ''
-          the location of the flake repo, used to calculate the location of facts and secrets
-        '';
-      };
-      machineName = lib.mkOption {
-        type = lib.types.str;
-        description = ''
-          the name of the machine
-        '';
-      };
-      clanPkgs = lib.mkOption {
-        default = self.packages.${pkgs.system};
-        defaultText = "self.packages.${pkgs.system}";
-        internal = true;
-      };
-    };
-    options.system.clan = lib.mkOption {
-      type = lib.types.submodule {
-        options = {
-          deployment.data = lib.mkOption {
-            type = lib.types.attrs;
-            description = ''
-              the data to be written to the deployment.json file
-            '';
-          };
-          deployment.file = lib.mkOption {
-            type = lib.types.path;
-            description = ''
-              the location of the deployment.json file
-            '';
-          };
-          deploymentAddress = lib.mkOption {
-            type = lib.types.str;
-            description = ''
-              the address of the deployment server
-            '';
-          };
-          secretsUploadDirectory = lib.mkOption {
-            type = lib.types.path;
-            description = ''
-              the directory on the deployment server where secrets are uploaded
-            '';
-          };
-          uploadSecrets = lib.mkOption {
-            type = lib.types.path;
-            description = ''
-              script to upload secrets to the deployment server
-            '';
-            default = "${pkgs.coreutils}/bin/true";
-          };
-          generateSecrets = lib.mkOption {
-            type = lib.types.path;
-            description = ''
-              script to generate secrets
-            '';
-            default = "${pkgs.coreutils}/bin/true";
-          };
-          vm.config = lib.mkOption {
-            type = lib.types.attrs;
-            description = ''
-              the vm config
-            '';
-          };
-          vm.create = lib.mkOption {
-            type = lib.types.path;
-            description = ''
-              json metadata about the vm
-            '';
-          };
-        };
-      };
-      description = ''
-        utility outputs for clan management of this machine
-      '';
-    };
-    # optimization for faster secret generate/upload and machines update
-    config = {
-      system.clan.deployment.data = {
-        inherit (config.system.clan) uploadSecrets generateSecrets;
-        inherit (config.clan.networking) deploymentAddress;
-        inherit (config.clanCore) secretsUploadDirectory;
-      };
-      system.clan.deployment.file = pkgs.writeText "deployment.json" (builtins.toJSON config.system.clan.deployment.data);
-    };
-  };
-}

nixosModules/clanCore/networking.nix

@@ -1,21 +0,0 @@
-{ config, lib, ... }:
-{
-  options.clan.networking = {
-    deploymentAddress = lib.mkOption {
-      description = ''
-        The target SSH node for deployment.
-
-        By default, the node's attribute name will be used.
-        If set to null, only local deployment will be supported.
-
-        format: user@host:port&SSH_OPTION=SSH_VALUE
-        examples:
-          - machine.example.com
-          - user@machine2.example.com
-          - root@example.com:2222&IdentityFile=/path/to/private/key
-      '';
-      type = lib.types.nullOr lib.types.str;
-      default = "root@${config.networking.hostName}";
-    };
-  };
-}

nixosModules/clanCore/options.nix

@@ -1,12 +0,0 @@
-{ pkgs, options, lib, ... }: {
-  options.clanCore.optionsNix = lib.mkOption {
-    type = lib.types.raw;
-    internal = true;
-    readOnly = true;
-    default = (pkgs.nixosOptionsDoc { inherit options; }).optionsNix;
-    defaultText = "optionsNix";
-    description = ''
-      This is to export nixos options used for `clan config`
-    '';
-  };
-}

nixosModules/clanCore/secrets/default.nix

@@ -1,121 +0,0 @@
-{ config, lib, ... }:
-{
-  options.clanCore.secretStore = lib.mkOption {
-    type = lib.types.enum [ "sops" "password-store" "custom" ];
-    default = "sops";
-    description = ''
-      method to store secrets
-      custom can be used to define a custom secret store.
-      one would have to define system.clan.generateSecrets and system.clan.uploadSecrets
-    '';
-  };
-
-  options.clanCore.secretsDirectory = lib.mkOption {
-    type = lib.types.path;
-    description = ''
-      The directory where secrets are installed to. This is backend specific.
-    '';
-  };
-
-  options.clanCore.secretsUploadDirectory = lib.mkOption {
-    type = lib.types.path;
-    description = ''
-      The directory where secrets are uploaded into, This is backend specific.
-    '';
-  };
-
-  options.clanCore.secretsPrefix = lib.mkOption {
-    type = lib.types.str;
-    default = "";
-    description = ''
-      Prefix for secrets. This is backend specific.
-    '';
-  };
-
-  options.clanCore.secrets = lib.mkOption {
-    default = { };
-    type = lib.types.attrsOf
-      (lib.types.submodule (secret: {
-        options = {
-          name = lib.mkOption {
-            type = lib.types.str;
-            default = secret.config._module.args.name;
-            description = ''
-              Namespace of the secret
-            '';
-          };
-          generator = lib.mkOption {
-            type = lib.types.str;
-            description = ''
-              Script to generate the secret.
-              The script will be called with the following variables:
-              - facts: path to a directory where facts can be stored
-              - secrets: path to a directory where secrets can be stored
-              The script is expected to generate all secrets and facts defined in the module.
-            '';
-          };
-          secrets =
-            let
-              config' = config;
-            in
-            lib.mkOption {
-              type = lib.types.attrsOf (lib.types.submodule ({ config, ... }: {
-                options = {
-                  name = lib.mkOption {
-                    type = lib.types.str;
-                    description = ''
-                      name of the secret
-                    '';
-                    default = config._module.args.name;
-                  };
-                  path = lib.mkOption {
-                    type = lib.types.str;
-                    description = ''
-                      path to a secret which is generated by the generator
-                    '';
-                    default = "${config'.clanCore.secretsDirectory}/${config'.clanCore.secretsPrefix}${config.name}";
-                  };
-                };
-              }));
-              description = ''
-                path where the secret is located in the filesystem
-              '';
-            };
-          facts = lib.mkOption {
-            default = { };
-            type = lib.types.attrsOf (lib.types.submodule (fact: {
-              options = {
-                name = lib.mkOption {
-                  type = lib.types.str;
-                  description = ''
-                    name of the fact
-                  '';
-                  default = fact.config._module.args.name;
-                };
-                path = lib.mkOption {
-                  type = lib.types.str;
-                  description = ''
-                    path to a fact which is generated by the generator
-                  '';
-                  default = "machines/${config.clanCore.machineName}/facts/${fact.config._module.args.name}";
-                };
-                value = lib.mkOption {
-                  defaultText = lib.literalExpression "\${config.clanCore.clanDir}/\${fact.config.path}";
-                  type = lib.types.nullOr lib.types.str;
-                  default =
-                    if builtins.pathExists "${config.clanCore.clanDir}/${fact.config.path}" then
-                      builtins.readFile "${config.clanCore.clanDir}/${fact.config.path}"
-                    else
-                      null;
-                };
-              };
-            }));
-          };
-        };
-      }));
-  };
-  imports = [
-    ./sops.nix
-    ./password-store.nix
-  ];
-}

nixosModules/clanCore/secrets/password-store.nix

@@ -1,116 +0,0 @@
-{ config, lib, pkgs, ... }:
-let
-  passwordstoreDir = "\${PASSWORD_STORE_DIR:-$HOME/.password-store}";
-in
-{
-  options.clan.password-store.targetDirectory = lib.mkOption {
-    type = lib.types.path;
-    default = "/etc/secrets";
-    description = ''
-      The directory where the password store is uploaded to.
-    '';
-  };
-  config = lib.mkIf (config.clanCore.secretStore == "password-store") {
-    clanCore.secretsDirectory = config.clan.password-store.targetDirectory;
-    clanCore.secretsUploadDirectory = config.clan.password-store.targetDirectory;
-    system.clan.generateSecrets = lib.mkIf (config.clanCore.secrets != { }) (
-      pkgs.writeScript "generate-secrets" ''
-        #!/bin/sh
-        set -efu
-
-        test -d "$CLAN_DIR"
-        PATH=${lib.makeBinPath [
-          pkgs.pass
-        ]}:$PATH
-
-        # TODO maybe initialize password store if it doesn't exist yet
-
-        ${lib.foldlAttrs (acc: n: v: ''
-          ${acc}
-          # ${n}
-          # if any of the secrets are missing, we regenerate all connected facts/secrets
-          (if ! (${lib.concatMapStringsSep " && " (x: "test -e ${passwordstoreDir}/machines/${config.clanCore.machineName}/${x.name}.gpg >/dev/null") (lib.attrValues v.secrets)}); then
-
-            tmpdir=$(mktemp -d)
-            trap "rm -rf $tmpdir" EXIT
-            cd $tmpdir
-
-            facts=$(mktemp -d)
-            trap "rm -rf $facts" EXIT
-            secrets=$(mktemp -d)
-            trap "rm -rf $secrets" EXIT
-            ( ${v.generator} )
-
-            ${lib.concatMapStrings (fact: ''
-              mkdir -p "$CLAN_DIR"/"$(dirname ${fact.path})"
-              cp "$facts"/${fact.name} "$CLAN_DIR"/${fact.path}
-            '') (lib.attrValues v.facts)}
-
-            ${lib.concatMapStrings (secret: ''
-              cat "$secrets"/${secret.name} | pass insert -m machines/${config.clanCore.machineName}/${secret.name}
-            '') (lib.attrValues v.secrets)}
-          fi)
-        '') "" config.clanCore.secrets}
-      ''
-    );
-    system.clan.uploadSecrets = pkgs.writeScript "upload-secrets" ''
-      #!/bin/sh
-      set -efu
-
-      umask 0077
-
-      PATH=${lib.makeBinPath [
-        pkgs.pass
-        pkgs.git
-        pkgs.findutils
-        pkgs.rsync
-      ]}:$PATH:${lib.getBin pkgs.openssh}
-
-      if test -e ${passwordstoreDir}/.git; then
-        local_pass_info=$(
-          git -C ${passwordstoreDir} log -1 --format=%H machines/${config.clanCore.machineName}
-          # we append a hash for every symlink, otherwise we would miss updates on
-          # files where the symlink points to
-          find ${passwordstoreDir}/machines/${config.clanCore.machineName} -type l \
-              -exec realpath {} + |
-            sort |
-            xargs -r -n 1 git -C ${passwordstoreDir} log -1 --format=%H
-        )
-        remote_pass_info=$(ssh ${config.clan.networking.deploymentAddress} -- ${lib.escapeShellArg ''
-          cat ${config.clan.password-store.targetDirectory}/.pass_info || :
-        ''} || :)
-
-        if test "$local_pass_info" = "$remote_pass_info"; then
-          echo secrets already match
-          exit 23
-        fi
-      fi
-
-      find ${passwordstoreDir}/machines/${config.clanCore.machineName} -type f -follow ! -name .gpg-id |
-      while read -r gpg_path; do
-
-        rel_name=''${gpg_path#${passwordstoreDir}}
-        rel_name=''${rel_name%.gpg}
-
-        pass_date=$(
-          if test -e ${passwordstoreDir}/.git; then
-            git -C ${passwordstoreDir} log -1 --format=%aI "$gpg_path"
-          fi
-        )
-        pass_name=$rel_name
-        tmp_path="$SECRETS_DIR"/$(basename $rel_name)
-
-        mkdir -p "$(dirname "$tmp_path")"
-        pass show "$pass_name" > "$tmp_path"
-        if [ -n "$pass_date" ]; then
-          touch -d "$pass_date" "$tmp_path"
-        fi
-      done
-
-      if test -n "''${local_pass_info-}"; then
-        echo "$local_pass_info" > "$SECRETS_DIR"/.pass_info
-      fi
-    '';
-  };
-}
-

nixosModules/clanCore/secrets/sops.nix

@@ -1,59 +0,0 @@
-{ config, lib, pkgs, ... }:
-let
-  secretsDir = config.clanCore.clanDir + "/sops/secrets";
-  groupsDir = config.clanCore.clanDir + "/sops/groups";
-
-
-  # My symlink is in the nixos module detected as a directory also it works in the repl. Is this because of pure evaluation?
-  containsSymlink = path:
-    builtins.pathExists path && (builtins.readFileType path == "directory" || builtins.readFileType path == "symlink");
-
-  containsMachine = parent: name: type:
-    type == "directory" && containsSymlink "${parent}/${name}/machines/${config.clanCore.machineName}";
-
-  containsMachineOrGroups = name: type:
-    (containsMachine secretsDir name type) || lib.any (group: type == "directory" && containsSymlink "${secretsDir}/${name}/groups/${group}") groups;
-
-  filterDir = filter: dir:
-    lib.optionalAttrs (builtins.pathExists dir)
-      (lib.filterAttrs filter (builtins.readDir dir));
-
-  groups = builtins.attrNames (filterDir (containsMachine groupsDir) groupsDir);
-  secrets = filterDir containsMachineOrGroups secretsDir;
-in
-{
-  config = lib.mkIf (config.clanCore.secretStore == "sops") {
-    clanCore.secretsDirectory = "/run/secrets";
-    clanCore.secretsPrefix = config.clanCore.machineName + "-";
-    system.clan = lib.mkIf (config.clanCore.secrets != { }) {
-
-      generateSecrets = pkgs.writeScript "generate-secrets" ''
-        #!${pkgs.python3}/bin/python
-        import json
-        from clan_cli.secrets.sops_generate import generate_secrets_from_nix
-        args = json.loads(${builtins.toJSON (builtins.toJSON { machine_name = config.clanCore.machineName; secret_submodules = config.clanCore.secrets; })})
-        generate_secrets_from_nix(**args)
-      '';
-      uploadSecrets = pkgs.writeScript "upload-secrets" ''
-        #!${pkgs.python3}/bin/python
-        import json
-        from clan_cli.secrets.sops_generate import upload_age_key_from_nix
-        # the second toJSON is needed to escape the string for the python
-        args = json.loads(${builtins.toJSON (builtins.toJSON { machine_name = config.clanCore.machineName; })})
-        upload_age_key_from_nix(**args)
-      '';
-    };
-    sops.secrets = builtins.mapAttrs
-      (name: _: {
-        sopsFile = config.clanCore.clanDir + "/sops/secrets/${name}/secret";
-        format = "binary";
-      })
-      secrets;
-    # To get proper error messages about missing secrets we need a dummy secret file that is always present
-    sops.defaultSopsFile = lib.mkIf config.sops.validateSopsFiles (lib.mkDefault (builtins.toString (pkgs.writeText "dummy.yaml" "")));
-
-    sops.age.keyFile = lib.mkIf (builtins.pathExists (config.clanCore.clanDir + "/sops/secrets/${config.clanCore.machineName}-age.key/secret"))
-      (lib.mkDefault "/var/lib/sops-nix/key.txt");
-    clanCore.secretsUploadDirectory = lib.mkDefault "/var/lib/sops-nix";
-  };
-}

nixosModules/clanCore/vm.nix

@@ -1,74 +0,0 @@
-{ lib, config, pkgs, options, extendModules, modulesPath, ... }:
-let
-  vmConfig = extendModules {
-    modules = [
-      (modulesPath + "/virtualisation/qemu-vm.nix")
-      {
-        virtualisation.fileSystems.${config.clanCore.secretsUploadDirectory} = lib.mkForce {
-          device = "secrets";
-          fsType = "9p";
-          neededForBoot = true;
-          options = [ "trans=virtio" "version=9p2000.L" "cache=loose" ];
-        };
-      }
-    ];
-  };
-in
-{
-  options = {
-    clan.virtualisation = {
-      cores = lib.mkOption {
-        type = lib.types.ints.positive;
-        default = 1;
-        description = lib.mdDoc ''
-          Specify the number of cores the guest is permitted to use.
-          The number can be higher than the available cores on the
-          host system.
-        '';
-      };
-
-      memorySize = lib.mkOption {
-        type = lib.types.ints.positive;
-        default = 1024;
-        description = lib.mdDoc ''
-          The memory size in megabytes of the virtual machine.
-        '';
-      };
-
-      graphics = lib.mkOption {
-        type = lib.types.bool;
-        default = true;
-        description = lib.mdDoc ''
-          Whether to run QEMU with a graphics window, or in nographic mode.
-          Serial console will be enabled on both settings, but this will
-          change the preferred console.
-        '';
-      };
-    };
-  };
-
-  config = {
-    system.clan.vm = {
-      # for clan vm inspect
-      config = {
-        inherit (config.clan.virtualisation) cores graphics;
-        memory_size = config.clan.virtualisation.memorySize;
-      };
-      # for clan vm create
-      create = pkgs.writeText "vm.json" (builtins.toJSON {
-        initrd = "${vmConfig.config.system.build.initialRamdisk}/${vmConfig.config.system.boot.loader.initrdFile}";
-        toplevel = vmConfig.config.system.build.toplevel;
-        regInfo = (pkgs.closureInfo { rootPaths = vmConfig.config.virtualisation.additionalPaths; });
-        inherit (config.clan.virtualisation) memorySize cores graphics;
-        generateSecrets = config.system.clan.generateSecrets;
-        uploadSecrets = config.system.clan.uploadSecrets;
-      });
-    };
-
-    virtualisation = lib.optionalAttrs (options.virtualisation ? cores) {
-      memorySize = lib.mkDefault config.clan.virtualisation.memorySize;
-      graphics = lib.mkDefault config.clan.virtualisation.graphics;
-      cores = lib.mkDefault config.clan.virtualisation.cores;
-    };
-  };
-}

nixosModules/clanCore/zerotier/default.nix

@@ -1,122 +0,0 @@
-{ config, lib, pkgs, ... }:
-let
-  cfg = config.clan.networking.zerotier;
-  facts = config.clanCore.secrets.zerotier.facts;
-  networkConfig = {
-    authTokens = [
-      null
-    ];
-    authorizationEndpoint = "";
-    capabilities = [ ];
-    clientId = "";
-    dns = [ ];
-    enableBroadcast = true;
-    id = cfg.networkId;
-    ipAssignmentPools = [ ];
-    mtu = 2800;
-    multicastLimit = 32;
-    name = "";
-    uwid = cfg.networkId;
-    objtype = "network";
-    private = !cfg.controller.public;
-    remoteTraceLevel = 0;
-    remoteTraceTarget = null;
-    revision = 1;
-    routes = [ ];
-    rules = [
-      {
-        not = false;
-        or = false;
-        type = "ACTION_ACCEPT";
-      }
-    ];
-    rulesSource = "";
-    ssoEnabled = false;
-    tags = [ ];
-    v4AssignMode = {
-      zt = false;
-    };
-    v6AssignMode = {
-      "6plane" = false;
-      rfc4193 = true;
-      zt = false;
-    };
-  };
-in
-{
-  options.clan.networking.zerotier = {
-    networkId = lib.mkOption {
-      type = lib.types.nullOr lib.types.str;
-      default = null;
-      description = ''
-        zerotier networking id
-      '';
-    };
-    controller = {
-      enable = lib.mkEnableOption "turn this machine into the networkcontroller";
-      public = lib.mkOption {
-        type = lib.types.bool;
-        default = false;
-        description = ''
-          everyone can join a public network without having the administrator to accept
-        '';
-      };
-    };
-  };
-  config = lib.mkMerge [
-    ({
-      # Override license so that we can build zerotierone without
-      # having to re-import nixpkgs.
-      services.zerotierone.package = lib.mkDefault (pkgs.zerotierone.overrideAttrs (_old: { meta = { }; }));
-    })
-    (lib.mkIf (cfg.networkId != null) {
-      systemd.network.networks.zerotier = {
-        matchConfig.Name = "zt*";
-        networkConfig = {
-          LLMNR = true;
-          LLDP = true;
-          MulticastDNS = true;
-          KeepConfiguration = "static";
-        };
-      };
-      networking.firewall.interfaces."zt+".allowedTCPPorts = [ 5353 ]; # mdns
-      networking.firewall.interfaces."zt+".allowedUDPPorts = [ 5353 ]; # mdns
-      networking.networkmanager.unmanaged = [ "interface-name:zt*" ];
-
-      services.zerotierone = {
-        enable = true;
-        joinNetworks = [ cfg.networkId ];
-      };
-    })
-    (lib.mkIf cfg.controller.enable {
-      # only the controller needs to have the key in the repo, the other clients can be dynamic
-      # we generate the zerotier code manually for the controller, since it's part of the bootstrap command
-      clanCore.secrets.zerotier = {
-        facts.zerotier-network-id = { };
-        secrets.zerotier-identity-secret = { };
-        generator = ''
-          export PATH=${lib.makeBinPath [ config.services.zerotierone.package pkgs.fakeroot ]}
-          ${pkgs.python3.interpreter} ${./generate-network.py} "$facts/zerotier-network-id" "$secrets/zerotier-identity-secret"
-        '';
-      };
-      environment.systemPackages = [ config.clanCore.clanPkgs.zerotier-members ];
-    })
-    (lib.mkIf ((config.clanCore.secrets ? zerotier) && (facts.zerotier-network-id.value != null)) {
-      clan.networking.zerotier.networkId = facts.zerotier-network-id.value;
-      environment.etc."zerotier/network-id".text = facts.zerotier-network-id.value;
-
-      systemd.services.zerotierone.serviceConfig.ExecStartPre = [
-        "+${pkgs.writeShellScript "init-zerotier" ''
-           cp ${config.clanCore.secrets.zerotier.secrets.zerotier-identity-secret.path} /var/lib/zerotier-one/identity.secret
-           mkdir -p /var/lib/zerotier-one/controller.d/network
-           ln -sfT ${pkgs.writeText "net.json" (builtins.toJSON networkConfig)} /var/lib/zerotier-one/controller.d/network/${cfg.networkId}.json
-         ''}"
-      ];
-      systemd.services.zerotierone.serviceConfig.ExecStartPost = [
-        "+${pkgs.writeShellScript "whitelist-controller" ''
-          ${config.clanCore.clanPkgs.zerotier-members}/bin/zerotier-members allow ${builtins.substring 0 10 cfg.networkId}
-        ''}"
-      ];
-    })
-  ];
-}

nixosModules/clanCore/zerotier/generate-network.py

@@ -1,143 +0,0 @@
-import argparse
-import contextlib
-import json
-import socket
-import subprocess
-import time
-import urllib.request
-from contextlib import contextmanager
-from pathlib import Path
-from tempfile import TemporaryDirectory
-from typing import Any, Iterator, Optional
-
-
-class ClanError(Exception):
-    pass
-
-
-def try_bind_port(port: int) -> bool:
-    tcp = socket.socket(socket.AF_INET, socket.SOCK_STREAM)
-    udp = socket.socket(socket.AF_INET, socket.SOCK_DGRAM)
-    with tcp, udp:
-        try:
-            tcp.bind(("127.0.0.1", port))
-            udp.bind(("127.0.0.1", port))
-            return True
-        except OSError:
-            return False
-
-
-def try_connect_port(port: int) -> bool:
-    sock = socket.socket(socket.AF_INET)
-    result = sock.connect_ex(("127.0.0.1", port))
-    sock.close()
-    return result == 0
-
-
-def find_free_port() -> Optional[int]:
-    """Find an unused localhost port from 1024-65535 and return it."""
-    with contextlib.closing(socket.socket(type=socket.SOCK_STREAM)) as sock:
-        sock.bind(("127.0.0.1", 0))
-        return sock.getsockname()[1]
-
-
-class ZerotierController:
-    def __init__(self, port: int, home: Path) -> None:
-        self.port = port
-        self.home = home
-        self.authtoken = (home / "authtoken.secret").read_text()
-        self.secret = (home / "identity.secret").read_text()
-
-    def _http_request(
-        self,
-        path: str,
-        method: str = "GET",
-        headers: dict[str, str] = {},
-        data: Optional[dict[str, Any]] = None,
-    ) -> dict[str, Any]:
-        body = None
-        headers = headers.copy()
-        if data is not None:
-            body = json.dumps(data).encode("ascii")
-            headers["Content-Type"] = "application/json"
-        headers["X-ZT1-AUTH"] = self.authtoken
-        url = f"http://127.0.0.1:{self.port}{path}"
-        req = urllib.request.Request(url, headers=headers, method=method, data=body)
-        resp = urllib.request.urlopen(req)
-        return json.load(resp)
-
-    def status(self) -> dict[str, Any]:
-        return self._http_request("/status")
-
-    def create_network(self, data: dict[str, Any] = {}) -> dict[str, Any]:
-        identity = (self.home / "identity.public").read_text()
-        node_id = identity.split(":")[0]
-        return self._http_request(
-            f"/controller/network/{node_id}______", method="POST", data=data
-        )
-
-    def get_network(self, id: str) -> dict[str, Any]:
-        return self._http_request(f"/controller/network/{id}")
-
-
-@contextmanager
-def zerotier_controller() -> Iterator[ZerotierController]:
-    # This check could be racy but it's unlikely in practice
-    controller_port = find_free_port()
-    if controller_port is None:
-        raise ClanError("cannot find a free port for zerotier controller")
-
-    with TemporaryDirectory() as d:
-        tempdir = Path(d)
-        home = tempdir / "zerotier-one"
-        home.mkdir()
-        cmd = [
-            "fakeroot",
-            "--",
-            "zerotier-one",
-            f"-p{controller_port}",
-            str(home),
-        ]
-        with subprocess.Popen(cmd) as p:
-            try:
-                print(
-                    f"wait for controller to be started on 127.0.0.1:{controller_port}...",
-                )
-                while not try_connect_port(controller_port):
-                    status = p.poll()
-                    if status is not None:
-                        raise ClanError(
-                            f"zerotier-one has been terminated unexpected with {status}"
-                        )
-                    time.sleep(0.1)
-                print()
-
-                yield ZerotierController(controller_port, home)
-            finally:
-                p.terminate()
-                p.wait()
-
-
-# TODO: allow merging more network configuration here
-def create_network() -> dict:
-    with zerotier_controller() as controller:
-        network = controller.create_network()
-        return {
-            "secret": controller.secret,
-            "networkid": network["nwid"],
-        }
-
-
-def main() -> None:
-    parser = argparse.ArgumentParser()
-    parser.add_argument("network_id")
-    parser.add_argument("identity_secret")
-    args = parser.parse_args()
-
-    zerotier = create_network()
-    Path(args.network_id).write_text(zerotier["networkid"])
-    Path(args.identity_secret).write_text(zerotier["secret"])
-
-
-if __name__ == "__main__":
-    main()

nixosModules/flake-module.nix

@@ -1,6 +0,0 @@
-{ ... }: {
-  flake.nixosModules = {
-    hidden-ssh-announce.imports = [ ./hidden-ssh-announce.nix ];
-    installer.imports = [ ./installer ];
-  };
-}

nixosModules/hidden-ssh-announce.nix

@@ -1,55 +0,0 @@
-{ config
-, lib
-, pkgs
-, ...
-}: {
-  options.hidden-ssh-announce = {
-    enable = lib.mkEnableOption "hidden-ssh-announce";
-    script = lib.mkOption {
-      type = lib.types.package;
-      default = pkgs.writers.writeDash "test-output" "echo $1";
-      description = ''
-        script to run when the hidden tor service was started and they hostname is known.
-        takes the hostname as $1
-      '';
-    };
-  };
-
-  config = lib.mkIf config.hidden-ssh-announce.enable {
-    services.openssh.enable = true;
-    services.tor = {
-      enable = true;
-      relay.onionServices.hidden-ssh = {
-        version = 3;
-        map = [
-          {
-            port = 22;
-            target.port = 22;
-          }
-        ];
-      };
-      client.enable = true;
-    };
-    systemd.services.hidden-ssh-announce = {
-      description = "announce hidden ssh";
-      after = [ "tor.service" "network-online.target" ];
-      wants = [ "tor.service" ];
-      wantedBy = [ "multi-user.target" ];
-      serviceConfig = {
-        # ${pkgs.tor}/bin/torify
-        ExecStart = pkgs.writers.writeDash "announce-hidden-service" ''
-          set -efu
-          until test -e ${config.services.tor.settings.DataDirectory}/onion/hidden-ssh/hostname; do
-            echo "still waiting for ${config.services.tor.settings.DataDirectory}/onion/hidden-ssh/hostname"
-            sleep 1
-          done
-
-          ${config.hidden-ssh-announce.script} "$(cat ${config.services.tor.settings.DataDirectory}/onion/hidden-ssh/hostname)"
-        '';
-        PrivateTmp = "true";
-        User = "tor";
-        Type = "oneshot";
-      };
-    };
-  };
-}

nixosModules/installer/default.nix

@@ -1,82 +0,0 @@
-{ lib
-, pkgs
-, modulesPath
-, ...
-}: {
-  systemd.tmpfiles.rules = [
-    "d /var/shared 0777 root root - -"
-  ];
-  imports = [
-    (modulesPath + "/profiles/installation-device.nix")
-    (modulesPath + "/profiles/all-hardware.nix")
-    (modulesPath + "/profiles/base.nix")
-  ];
-  services.openssh.settings.PermitRootLogin = "yes";
-  system.activationScripts.root-password = ''
-    mkdir -p /var/shared
-    ${pkgs.pwgen}/bin/pwgen -s 16 1 > /var/shared/root-password
-    echo "root:$(cat /var/shared/root-password)" | chpasswd
-  '';
-  hidden-ssh-announce = {
-    enable = true;
-    script = pkgs.writers.writeDash "write-hostname" ''
-      set -efu
-      mkdir -p /var/shared
-      echo "$1" > /var/shared/onion-hostname
-      ${pkgs.jq}/bin/jq -nc \
-        --arg password "$(cat /var/shared/root-password)" \
-        --arg address "$(cat /var/shared/onion-hostname)" '{
-          password: $password, address: $address
-        }' > /var/shared/login.info
-      cat /var/shared/login.info |
-        ${pkgs.qrencode}/bin/qrencode -t utf8 -o /var/shared/qrcode.utf8
-      cat /var/shared/login.info |
-        ${pkgs.qrencode}/bin/qrencode -t png -o /var/shared/qrcode.png
-    '';
-  };
-  services.getty.autologinUser = lib.mkForce "root";
-  programs.bash.interactiveShellInit = ''
-    if [ "$(tty)" = "/dev/tty1" ]; then
-      echo 'waiting for tor to generate the hidden service'
-      until test -e /var/shared/qrcode.utf8; do echo .; sleep 1; done
-      cat /var/shared/qrcode.utf8
-    fi
-  '';
-  boot.loader.grub.efiInstallAsRemovable = true;
-  boot.loader.grub.efiSupport = true;
-  disko.devices = {
-    disk = {
-      stick = {
-        type = "disk";
-        device = "/vda";
-        imageSize = "3G";
-        content = {
-          type = "gpt";
-          partitions = {
-            boot = {
-              size = "1M";
-              type = "EF02"; # for grub MBR
-            };
-            ESP = {
-              size = "100M";
-              type = "EF00";
-              content = {
-                type = "filesystem";
-                format = "vfat";
-                mountpoint = "/boot";
-              };
-            };
-            root = {
-              size = "100%";
-              content = {
-                type = "filesystem";
-                format = "ext4";
-                mountpoint = "/";
-              };
-            };
-          };
-        };
-      };
-    };
-  };
-}

pkgs/clan-cli/.vscode/settings.json

@@ -12,4 +12,11 @@
     ],
     "python.testing.unittestEnabled": false,
     "python.testing.pytestEnabled": true,
+    "search.exclude": {
+        "**/.direnv": true
+    },
+    "python.linting.mypyPath": "mypy",
+    "python.linting.mypyEnabled": true,
+    "python.linting.enabled": true,
+    "python.defaultInterpreterPath": "python"
 }

pkgs/clan-cli/clan_cli/__init__.py

@@ -3,7 +3,7 @@ import sys
 from types import ModuleType
 from typing import Optional
 
-from . import config, create, join, machines, secrets, vms, webui
+from . import config, flakes, join, machines, secrets, vms, webui
 from .ssh import cli as ssh_cli
 
 argcomplete: Optional[ModuleType] = None
@@ -24,10 +24,10 @@ def create_parser(prog: Optional[str] = None) -> argparse.ArgumentParser:
 
     subparsers = parser.add_subparsers()
 
-    parser_create = subparsers.add_parser(
-        "create", help="create a clan flake inside the current directory"
+    parser_flake = subparsers.add_parser(
+        "flakes", help="create a clan flake inside the current directory"
     )
-    create.register_parser(parser_create)
+    flakes.register_parser(parser_flake)
 
     parser_join = subparsers.add_parser("join", help="join a remote clan")
     join.register_parser(parser_join)

pkgs/clan-cli/clan_cli/async_cmd.py

@@ -1,18 +1,35 @@
 import asyncio
 import logging
 import shlex
+from pathlib import Path
+from typing import Any, Callable, Coroutine, Dict, NamedTuple, Optional
 
 from .errors import ClanError
 
 log = logging.getLogger(__name__)
 
 
-async def run(cmd: list[str]) -> bytes:
+class CmdOut(NamedTuple):
+    stdout: str
+    stderr: str
+    cwd: Optional[Path] = None
+
+
+async def run(cmd: list[str], cwd: Optional[Path] = None) -> CmdOut:
     log.debug(f"$: {shlex.join(cmd)}")
+    cwd_res = None
+    if cwd is not None:
+        if not cwd.exists():
+            raise ClanError(f"Working directory {cwd} does not exist")
+        if not cwd.is_dir():
+            raise ClanError(f"Working directory {cwd} is not a directory")
+        cwd_res = cwd.resolve()
+        log.debug(f"Working directory: {cwd_res}")
     proc = await asyncio.create_subprocess_exec(
         *cmd,
         stdout=asyncio.subprocess.PIPE,
         stderr=asyncio.subprocess.PIPE,
+        cwd=cwd_res,
     )
     stdout, stderr = await proc.communicate()
 
@@ -20,9 +37,30 @@ async def run(cmd: list[str]) -> bytes:
         raise ClanError(
             f"""
 command: {shlex.join(cmd)}
+working directory: {cwd_res}
 exit code: {proc.returncode}
-command output:
+stderr:
 {stderr.decode("utf-8")}
+stdout:
+{stdout.decode("utf-8")}
 """
         )
-    return stdout
+
+    return CmdOut(stdout.decode("utf-8"), stderr.decode("utf-8"), cwd=cwd)
+
+
+def runforcli(
+    func: Callable[..., Coroutine[Any, Any, Dict[str, CmdOut]]], *args: Any
+) -> None:
+    try:
+        res = asyncio.run(func(*args))
+
+        for i in res.items():
+            name, out = i
+            if out.stderr:
+                print(f"{name}: {out.stderr}", end="")
+            if out.stdout:
+                print(f"{name}: {out.stdout}", end="")
+    except ClanError as e:
+        print(e)
+        exit(1)

pkgs/clan-cli/clan_cli/config/__init__.py

@@ -9,10 +9,10 @@ import sys
 from pathlib import Path
 from typing import Any, Optional, Tuple, get_origin
 
-from clan_cli.dirs import get_clan_flake_toplevel
+from clan_cli.dirs import machine_settings_file, specific_flake_dir
 from clan_cli.errors import ClanError
+from clan_cli.flakes.types import FlakeName
 from clan_cli.git import commit_file
-from clan_cli.machines.folders import machine_settings_file
 from clan_cli.nix import nix_eval
 
 script_dir = Path(__file__).parent
@@ -107,8 +107,10 @@ def cast(value: Any, type: Any, opt_description: str) -> Any:
         )
 
 
-def options_for_machine(machine_name: str, show_trace: bool = False) -> dict:
-    clan_dir = get_clan_flake_toplevel()
+def options_for_machine(
+    flake_name: FlakeName, machine_name: str, show_trace: bool = False
+) -> dict:
+    clan_dir = specific_flake_dir(flake_name)
     flags = []
     if show_trace:
         flags.append("--show-trace")
@@ -129,9 +131,9 @@ def options_for_machine(machine_name: str, show_trace: bool = False) -> dict:
 
 
 def read_machine_option_value(
-    machine_name: str, option: str, show_trace: bool = False
+    flake_name: FlakeName, machine_name: str, option: str, show_trace: bool = False
 ) -> str:
-    clan_dir = get_clan_flake_toplevel()
+    clan_dir = specific_flake_dir(flake_name)
     # use nix eval to read from .#nixosConfigurations.default.config.{option}
     # this will give us the evaluated config with the options attribute
     cmd = nix_eval(
@@ -164,19 +166,19 @@ def get_or_set_option(args: argparse.Namespace) -> None:
         # load options
         if args.options_file is None:
             options = options_for_machine(
-                machine_name=args.machine, show_trace=args.show_trace
+                args.flake, machine_name=args.machine, show_trace=args.show_trace
             )
         else:
             with open(args.options_file) as f:
                 options = json.load(f)
         # compute settings json file location
         if args.settings_file is None:
-            get_clan_flake_toplevel()
-            settings_file = machine_settings_file(args.machine)
+            settings_file = machine_settings_file(args.flake, args.machine)
         else:
             settings_file = args.settings_file
         # set the option with the given value
         set_option(
+            flake_name=args.flake,
             option=args.option,
             value=args.value,
             options=options,
@@ -185,7 +187,7 @@ def get_or_set_option(args: argparse.Namespace) -> None:
             show_trace=args.show_trace,
         )
         if not args.quiet:
-            new_value = read_machine_option_value(args.machine, args.option)
+            new_value = read_machine_option_value(args.flake, args.machine, args.option)
             print(f"New Value for {args.option}:")
             print(new_value)
 
@@ -242,6 +244,7 @@ def find_option(
 
 
 def set_option(
+    flake_name: FlakeName,
     option: str,
     value: Any,
     options: dict,
@@ -290,7 +293,7 @@ def set_option(
         json.dump(new_config, f, indent=2)
         print(file=f)  # add newline at the end of the file to make git happy
 
-    if settings_file.resolve().is_relative_to(get_clan_flake_toplevel()):
+    if settings_file.resolve().is_relative_to(specific_flake_dir(flake_name)):
         commit_file(settings_file, commit_message=f"Set option {option_description}")
 
 
@@ -305,7 +308,11 @@ def register_parser(
 
     # inject callback function to process the input later
     parser.set_defaults(func=get_or_set_option)
-
+    parser.add_argument(
+        "flake",
+        type=str,
+        help="name of the flake to set machine options for",
+    )
     parser.add_argument(
         "--machine",
         "-m",

pkgs/clan-cli/clan_cli/config/machine.py

@@ -2,38 +2,45 @@ import json
 import subprocess
 import sys
 from pathlib import Path
-from typing import Optional
 
 from fastapi import HTTPException
 
-from clan_cli.dirs import get_clan_flake_toplevel, nixpkgs_source
+from clan_cli.dirs import (
+    machine_settings_file,
+    nixpkgs_source,
+    specific_flake_dir,
+    specific_machine_dir,
+)
 from clan_cli.git import commit_file, find_git_repo_root
-from clan_cli.machines.folders import machine_folder, machine_settings_file
 from clan_cli.nix import nix_eval
 
+from ..flakes.types import FlakeName
 
-def config_for_machine(machine_name: str) -> dict:
+
+def config_for_machine(flake_name: FlakeName, machine_name: str) -> dict:
     # read the config from a json file located at {flake}/machines/{machine_name}/settings.json
-    if not machine_folder(machine_name).exists():
+    if not specific_machine_dir(flake_name, machine_name).exists():
         raise HTTPException(
             status_code=404,
             detail=f"Machine {machine_name} not found. Create the machine first`",
         )
-    settings_path = machine_settings_file(machine_name)
+    settings_path = machine_settings_file(flake_name, machine_name)
     if not settings_path.exists():
         return {}
     with open(settings_path) as f:
         return json.load(f)
 
 
-def set_config_for_machine(machine_name: str, config: dict) -> None:
+def set_config_for_machine(
+    flake_name: FlakeName, machine_name: str, config: dict
+) -> None:
     # write the config to a json file located at {flake}/machines/{machine_name}/settings.json
-    if not machine_folder(machine_name).exists():
+    if not specific_machine_dir(flake_name, machine_name).exists():
         raise HTTPException(
             status_code=404,
             detail=f"Machine {machine_name} not found. Create the machine first`",
         )
-    settings_path = machine_settings_file(machine_name)
+    settings_path = machine_settings_file(flake_name, machine_name)
     settings_path.parent.mkdir(parents=True, exist_ok=True)
     with open(settings_path, "w") as f:
         json.dump(config, f)
@@ -43,9 +50,9 @@ def set_config_for_machine(machine_name: str, config: dict) -> None:
         commit_file(settings_path, repo_dir)
 
 
-def schema_for_machine(machine_name: str, flake: Optional[Path] = None) -> dict:
-    if flake is None:
-        flake = get_clan_flake_toplevel()
+def schema_for_machine(flake_name: FlakeName, machine_name: str) -> dict:
+    flake = specific_flake_dir(flake_name)
+
     # use nix eval to lib.evalModules .#nixosModules.machine-{machine_name}
     proc = subprocess.run(
         nix_eval(

pkgs/clan-cli/clan_cli/create.py

@@ -1,25 +0,0 @@
-# !/usr/bin/env python3
-import argparse
-import subprocess
-
-from .nix import nix_command
-
-
-def create(args: argparse.Namespace) -> None:
-    # TODO create clan template in flake
-    subprocess.run(
-        nix_command(
-            [
-                "flake",
-                "init",
-                "-t",
-                "git+https://git.clan.lol/clan/clan-core#new-clan",
-            ]
-        ),
-        check=True,
-    )
-
-
-# takes a (sub)parser and configures it
-def register_parser(parser: argparse.ArgumentParser) -> None:
-    parser.set_defaults(func=create)

pkgs/clan-cli/clan_cli/dirs.py

@@ -4,9 +4,10 @@ from pathlib import Path
 from typing import Optional
 
 from .errors import ClanError
+from .flakes.types import FlakeName
 
 
-def get_clan_flake_toplevel() -> Path:
+def _get_clan_flake_toplevel() -> Path:
     return find_toplevel([".clan-flake", ".git", ".hg", ".svn", "flake.nix"])
 
 
@@ -38,6 +39,55 @@ def user_config_dir() -> Path:
         return Path(os.getenv("XDG_CONFIG_HOME", os.path.expanduser("~/.config")))
 
 
+def user_data_dir() -> Path:
+    if sys.platform == "win32":
+        return Path(os.getenv("APPDATA", os.path.expanduser("~\\AppData\\Roaming\\")))
+    elif sys.platform == "darwin":
+        return Path(os.path.expanduser("~/Library/Application Support/"))
+    else:
+        return Path(os.getenv("XDG_DATA_HOME", os.path.expanduser("~/.local/state")))
+
+
+def clan_data_dir() -> Path:
+    path = user_data_dir() / "clan"
+    if not path.exists():
+        path.mkdir()
+    return path.resolve()
+
+
+def clan_config_dir() -> Path:
+    path = user_config_dir() / "clan"
+    if not path.exists():
+        path.mkdir()
+    return path.resolve()
+
+
+def clan_flakes_dir() -> Path:
+    path = clan_data_dir() / "flake"
+    if not path.exists():
+        path.mkdir()
+    return path.resolve()
+
+
+def specific_flake_dir(flake_name: FlakeName) -> Path:
+    flake_dir = clan_flakes_dir() / flake_name
+    if not flake_dir.exists():
+        raise ClanError(f"Flake {flake_name} does not exist")
+    return flake_dir
+
+
+def machines_dir(flake_name: FlakeName) -> Path:
+    return specific_flake_dir(flake_name) / "machines"
+
+
+def specific_machine_dir(flake_name: FlakeName, machine: str) -> Path:
+    return machines_dir(flake_name) / machine
+
+
+def machine_settings_file(flake_name: FlakeName, machine: str) -> Path:
+    return specific_machine_dir(flake_name, machine) / "settings.json"
+
+
 def module_root() -> Path:
     return Path(__file__).parent
 

pkgs/clan-cli/clan_cli/flakes/__init__.py

@@ -0,0 +1,20 @@
+# !/usr/bin/env python3
+import argparse
+
+from .create import register_create_parser
+from .list import register_list_parser
+
+
+# takes a (sub)parser and configures it
+def register_parser(parser: argparse.ArgumentParser) -> None:
+    subparser = parser.add_subparsers(
+        title="command",
+        description="the command to run",
+        help="the command to run",
+        required=True,
+    )
+    create_parser = subparser.add_parser("create", help="Create a clan flake")
+    register_create_parser(create_parser)
+
+    list_parser = subparser.add_parser("list", help="List clan flakes")
+    register_list_parser(list_parser)

pkgs/clan-cli/clan_cli/flakes/create.py

@@ -0,0 +1,69 @@
+# !/usr/bin/env python3
+import argparse
+from pathlib import Path
+from typing import Dict
+
+from pydantic import AnyUrl
+from pydantic.tools import parse_obj_as
+
+from ..async_cmd import CmdOut, run, runforcli
+from ..dirs import clan_flakes_dir
+from ..nix import nix_command, nix_shell
+
+DEFAULT_URL: AnyUrl = parse_obj_as(
+    AnyUrl, "git+https://git.clan.lol/clan/clan-core#new-clan"
+)
+
+
+async def create_flake(directory: Path, url: AnyUrl) -> Dict[str, CmdOut]:
+    if not directory.exists():
+        directory.mkdir()
+    response = {}
+    command = nix_command(
+        [
+            "flake",
+            "init",
+            "-t",
+            url,
+        ]
+    )
+    out = await run(command, directory)
+    response["flake init"] = out
+
+    command = nix_shell(["git"], ["git", "init"])
+    out = await run(command, directory)
+    response["git init"] = out
+
+    command = nix_shell(["git"], ["git", "add", "."])
+    out = await run(command, directory)
+    response["git add"] = out
+
+    command = nix_shell(["git"], ["git", "config", "user.name", "clan-tool"])
+    out = await run(command, directory)
+    response["git config"] = out
+
+    command = nix_shell(["git"], ["git", "config", "user.email", "clan@example.com"])
+    out = await run(command, directory)
+    response["git config"] = out
+
+    command = nix_shell(["git"], ["git", "commit", "-a", "-m", "Initial commit"])
+    out = await run(command, directory)
+    response["git commit"] = out
+
+    return response
+
+
+def create_flake_command(args: argparse.Namespace) -> None:
+    flake_dir = clan_flakes_dir() / args.name
+    runforcli(create_flake, flake_dir, DEFAULT_URL)
+
+
+# takes a (sub)parser and configures it
+def register_create_parser(parser: argparse.ArgumentParser) -> None:
+    parser.add_argument(
+        "name",
+        type=str,
+        help="name for the flake",
+    )
+    # parser.add_argument("name", type=str, help="name of the flake")
+    parser.set_defaults(func=create_flake_command)

pkgs/clan-cli/clan_cli/flakes/list.py

@@ -0,0 +1,27 @@
+import argparse
+import logging
+import os
+
+from ..dirs import clan_flakes_dir
+
+log = logging.getLogger(__name__)
+
+
+def list_flakes() -> list[str]:
+    path = clan_flakes_dir()
+    log.debug(f"Listing machines in {path}")
+    if not path.exists():
+        return []
+    objs: list[str] = []
+    for f in os.listdir(path):
+        objs.append(f)
+    return objs
+
+
+def list_command(args: argparse.Namespace) -> None:
+    for flake in list_flakes():
+        print(flake)
+
+
+def register_list_parser(parser: argparse.ArgumentParser) -> None:
+    parser.set_defaults(func=list_command)

pkgs/clan-cli/clan_cli/flakes/types.py

@@ -0,0 +1,3 @@
+from typing import NewType
+
+FlakeName = NewType("FlakeName", str)

pkgs/clan-cli/clan_cli/machines/__init__.py

@@ -23,8 +23,8 @@ def register_parser(parser: argparse.ArgumentParser) -> None:
     create_parser = subparser.add_parser("create", help="Create a machine")
     register_create_parser(create_parser)
 
-    remove_parser = subparser.add_parser("remove", help="Remove a machine")
-    register_delete_parser(remove_parser)
+    delete_parser = subparser.add_parser("delete", help="Delete a machine")
+    register_delete_parser(delete_parser)
 
     list_parser = subparser.add_parser("list", help="List machines")
     register_list_parser(list_parser)

pkgs/clan-cli/clan_cli/machines/create.py

@@ -1,20 +1,52 @@
 import argparse
+import logging
+from typing import Dict
 
-from .folders import machine_folder
+from ..async_cmd import CmdOut, run, runforcli
+from ..dirs import specific_flake_dir, specific_machine_dir
+from ..errors import ClanError
+from ..flakes.types import FlakeName
+from ..nix import nix_shell
+
+log = logging.getLogger(__name__)
 
 
-def create_machine(name: str) -> None:
-    folder = machine_folder(name)
+async def create_machine(flake_name: FlakeName, machine_name: str) -> Dict[str, CmdOut]:
+    folder = specific_machine_dir(flake_name, machine_name)
     folder.mkdir(parents=True, exist_ok=True)
+
     # create empty settings.json file inside the folder
     with open(folder / "settings.json", "w") as f:
         f.write("{}")
+    response = {}
+    out = await run(nix_shell(["git"], ["git", "add", str(folder)]), cwd=folder)
+    response["git add"] = out
+
+    out = await run(
+        nix_shell(
+            ["git"],
+            ["git", "commit", "-m", f"Added machine {machine_name}", str(folder)],
+        ),
+        cwd=folder,
+    )
+    response["git commit"] = out
+
+    return response
 
 
 def create_command(args: argparse.Namespace) -> None:
-    create_machine(args.host)
+    try:
+        flake_dir = specific_flake_dir(args.flake)
+        runforcli(create_machine, flake_dir, args.machine)
+    except ClanError as e:
+        print(e)
 
 
 def register_create_parser(parser: argparse.ArgumentParser) -> None:
-    parser.add_argument("host", type=str)
+    parser.add_argument("machine", type=str)
+    parser.add_argument(
+        "flake",
+        type=str,
+        help="name of the flake to create machine for",
+    )
     parser.set_defaults(func=create_command)

pkgs/clan-cli/clan_cli/machines/delete.py

@@ -1,12 +1,12 @@
 import argparse
 import shutil
 
+from ..dirs import specific_machine_dir
 from ..errors import ClanError
-from .folders import machine_folder
 
 
 def delete_command(args: argparse.Namespace) -> None:
-    folder = machine_folder(args.host)
+    folder = specific_machine_dir(args.flake, args.host)
     if folder.exists():
         shutil.rmtree(folder)
     else:
@@ -15,4 +15,9 @@ def delete_command(args: argparse.Namespace) -> None:
 
 def register_delete_parser(parser: argparse.ArgumentParser) -> None:
     parser.add_argument("host", type=str)
+    parser.add_argument(
+        "flake",
+        type=str,
+        help="name of the flake to create machine for",
+    )
     parser.set_defaults(func=delete_command)

pkgs/clan-cli/clan_cli/machines/facts.py

@@ -1,9 +1,10 @@
-from .folders import machine_folder
+from ..dirs import specific_machine_dir
+from ..flakes.types import FlakeName
 
 
-def machine_has_fact(machine: str, fact: str) -> bool:
-    return (machine_folder(machine) / "facts" / fact).exists()
+def machine_has_fact(flake_name: FlakeName, machine: str, fact: str) -> bool:
+    return (specific_machine_dir(flake_name, machine) / "facts" / fact).exists()
 
 
-def machine_get_fact(machine: str, fact: str) -> str:
-    return (machine_folder(machine) / "facts" / fact).read_text()
+def machine_get_fact(flake_name: FlakeName, machine: str, fact: str) -> str:
+    return (specific_machine_dir(flake_name, machine) / "facts" / fact).read_text()

pkgs/clan-cli/clan_cli/machines/folders.py

@@ -1,15 +0,0 @@
-from pathlib import Path
-
-from ..dirs import get_clan_flake_toplevel
-
-
-def machines_folder() -> Path:
-    return get_clan_flake_toplevel() / "machines"
-
-
-def machine_folder(machine: str) -> Path:
-    return machines_folder() / machine
-
-
-def machine_settings_file(machine: str) -> Path:
-    return machine_folder(machine) / "settings.json"

pkgs/clan-cli/clan_cli/machines/install.py

@@ -3,6 +3,7 @@ import subprocess
 from pathlib import Path
 from tempfile import TemporaryDirectory
 
+from ..dirs import specific_flake_dir
 from ..machines.machines import Machine
 from ..nix import nix_shell
 from ..secrets.generate import generate_secrets
@@ -26,7 +27,7 @@ def install_nixos(machine: Machine) -> None:
                 [
                     "nixos-anywhere",
                     "-f",
-                    f"{machine.clan_dir}#{flake_attr}",
+                    f"{machine.flake_dir}#{flake_attr}",
                     "-t",
                     "--no-reboot",
                     "--extra-files",
@@ -39,7 +40,7 @@ def install_nixos(machine: Machine) -> None:
 
 
 def install_command(args: argparse.Namespace) -> None:
-    machine = Machine(args.machine)
+    machine = Machine(args.machine, flake_dir=specific_flake_dir(args.flake))
     machine.deployment_address = args.target_host
 
     install_nixos(machine)
@@ -56,5 +57,9 @@ def register_install_parser(parser: argparse.ArgumentParser) -> None:
         type=str,
         help="ssh address to install to in the form of user@host:2222",
     )
-
+    parser.add_argument(
+        "flake",
+        type=str,
+        help="name of the flake to install machine from",
+    )
     parser.set_defaults(func=install_command)

pkgs/clan-cli/clan_cli/machines/list.py

@@ -2,14 +2,15 @@ import argparse
 import logging
 import os
 
-from .folders import machines_folder
+from ..dirs import machines_dir
+from ..flakes.types import FlakeName
 from .types import validate_hostname
 
 log = logging.getLogger(__name__)
 
 
-def list_machines() -> list[str]:
-    path = machines_folder()
+def list_machines(flake_name: FlakeName) -> list[str]:
+    path = machines_dir(flake_name)
     log.debug(f"Listing machines in {path}")
     if not path.exists():
         return []
@@ -21,9 +22,14 @@ def list_machines() -> list[str]:
 
 
 def list_command(args: argparse.Namespace) -> None:
-    for machine in list_machines():
+    for machine in list_machines(args.flake):
         print(machine)
 
 
 def register_list_parser(parser: argparse.ArgumentParser) -> None:
+    parser.add_argument(
+        "flake",
+        type=str,
+        help="name of the flake to create machine for",
+    )
     parser.set_defaults(func=list_command)

pkgs/clan-cli/clan_cli/machines/machines.py

@@ -5,7 +5,6 @@ import sys
 from pathlib import Path
 from typing import Optional
 
-from ..dirs import get_clan_flake_toplevel
 from ..nix import nix_build, nix_config, nix_eval
 from ..ssh import Host, parse_deployment_address
 
@@ -31,7 +30,7 @@ class Machine:
     def __init__(
         self,
         name: str,
-        clan_dir: Optional[Path] = None,
+        flake_dir: Path,
         machine_data: Optional[dict] = None,
     ) -> None:
         """
@@ -41,13 +40,10 @@ class Machine:
         @machine_json: can be optionally used to skip evaluation of the machine, location of the json file with machine data
         """
         self.name = name
-        if clan_dir is None:
-            self.clan_dir = get_clan_flake_toplevel()
-        else:
-            self.clan_dir = clan_dir
+        self.flake_dir = flake_dir
 
         if machine_data is None:
-            self.machine_data = build_machine_data(name, self.clan_dir)
+            self.machine_data = build_machine_data(name, self.flake_dir)
         else:
             self.machine_data = machine_data
 
@@ -68,7 +64,7 @@ class Machine:
         @secrets_dir: the directory to store the secrets in
         """
         env = os.environ.copy()
-        env["CLAN_DIR"] = str(self.clan_dir)
+        env["CLAN_DIR"] = str(self.flake_dir)
         env["PYTHONPATH"] = str(
             ":".join(sys.path)
         )  # TODO do this in the clanCore module
@@ -95,7 +91,7 @@ class Machine:
         @attr: the attribute to get
         """
         output = subprocess.run(
-            nix_eval([f"path:{self.clan_dir}#{attr}"]),
+            nix_eval([f"path:{self.flake_dir}#{attr}"]),
             stdout=subprocess.PIPE,
             check=True,
             text=True,
@@ -108,7 +104,7 @@ class Machine:
         @attr: the attribute to get
         """
         outpath = subprocess.run(
-            nix_build([f"path:{self.clan_dir}#{attr}"]),
+            nix_build([f"path:{self.flake_dir}#{attr}"]),
             stdout=subprocess.PIPE,
             check=True,
             text=True,

pkgs/clan-cli/clan_cli/machines/update.py

@@ -4,7 +4,7 @@ import os
 import subprocess
 from pathlib import Path
 
-from ..dirs import get_clan_flake_toplevel
+from ..dirs import specific_flake_dir
 from ..machines.machines import Machine
 from ..nix import nix_build, nix_command, nix_config
 from ..secrets.generate import generate_secrets
@@ -95,25 +95,29 @@ def get_all_machines(clan_dir: Path) -> HostGroup:
         host = parse_deployment_address(
             name,
             machine_data["deploymentAddress"],
-            meta={"machine": Machine(name=name, machine_data=machine_data)},
+            meta={
+                "machine": Machine(
+                    name=name, flake_dir=clan_dir, machine_data=machine_data
+                )
+            },
         )
         hosts.append(host)
     return HostGroup(hosts)
 
 
-def get_selected_machines(machine_names: list[str], clan_dir: Path) -> HostGroup:
+def get_selected_machines(machine_names: list[str], flake_dir: Path) -> HostGroup:
     hosts = []
     for name in machine_names:
-        machine = Machine(name=name, clan_dir=clan_dir)
+        machine = Machine(name=name, flake_dir=flake_dir)
         hosts.append(machine.host)
     return HostGroup(hosts)
 
 
 # FIXME: we want some kind of inventory here.
 def update(args: argparse.Namespace) -> None:
-    clan_dir = get_clan_flake_toplevel()
+    flake_dir = specific_flake_dir(args.flake)
     if len(args.machines) == 1 and args.target_host is not None:
-        machine = Machine(name=args.machines[0], clan_dir=clan_dir)
+        machine = Machine(name=args.machines[0], flake_dir=flake_dir)
         machine.deployment_address = args.target_host
         host = parse_deployment_address(
             args.machines[0],
@@ -127,11 +131,11 @@ def update(args: argparse.Namespace) -> None:
         exit(1)
     else:
         if len(args.machines) == 0:
-            machines = get_all_machines(clan_dir)
+            machines = get_all_machines(flake_dir)
         else:
-            machines = get_selected_machines(args.machines, clan_dir)
+            machines = get_selected_machines(args.machines, flake_dir)
 
-    deploy_nixos(machines, clan_dir)
+    deploy_nixos(machines, flake_dir)
 
 
 def register_update_parser(parser: argparse.ArgumentParser) -> None:
@@ -142,6 +146,11 @@ def register_update_parser(parser: argparse.ArgumentParser) -> None:
         nargs="*",
         default=[],
     )
+    parser.add_argument(
+        "flake",
+        type=str,
+        help="name of the flake to update machine for",
+    )
     parser.add_argument(
         "--target-host",
         type=str,

pkgs/clan-cli/clan_cli/nix.py

@@ -2,8 +2,11 @@ import json
 import os
 import subprocess
 import tempfile
+from pathlib import Path
 from typing import Any
 
+from pydantic import AnyUrl
+
 from .dirs import nixpkgs_flake, nixpkgs_source
 
 
@@ -11,7 +14,7 @@ def nix_command(flags: list[str]) -> list[str]:
     return ["nix", "--extra-experimental-features", "nix-command flakes"] + flags
 
 
-def nix_flake_show(flake_url: str) -> list[str]:
+def nix_flake_show(flake_url: AnyUrl | Path) -> list[str]:
     return nix_command(
         [
             "flake",

pkgs/clan-cli/clan_cli/secrets/folders.py

@@ -3,17 +3,18 @@ import shutil
 from pathlib import Path
 from typing import Callable
 
-from ..dirs import get_clan_flake_toplevel
+from ..dirs import specific_flake_dir
 from ..errors import ClanError
+from ..flakes.types import FlakeName
 
 
-def get_sops_folder() -> Path:
-    return get_clan_flake_toplevel() / "sops"
+def get_sops_folder(flake_name: FlakeName) -> Path:
+    return specific_flake_dir(flake_name) / "sops"
 
 
-def gen_sops_subfolder(subdir: str) -> Callable[[], Path]:
-    def folder() -> Path:
-        return get_clan_flake_toplevel() / "sops" / subdir
+def gen_sops_subfolder(subdir: str) -> Callable[[FlakeName], Path]:
+    def folder(flake_name: FlakeName) -> Path:
+        return specific_flake_dir(flake_name) / "sops" / subdir
 
     return folder
 

pkgs/clan-cli/clan_cli/secrets/generate.py

@@ -6,6 +6,7 @@ import sys
 
 from clan_cli.errors import ClanError
 
+from ..dirs import specific_flake_dir
 from ..machines.machines import Machine
 
 log = logging.getLogger(__name__)
@@ -13,7 +14,7 @@ log = logging.getLogger(__name__)
 
 def generate_secrets(machine: Machine) -> None:
     env = os.environ.copy()
-    env["CLAN_DIR"] = str(machine.clan_dir)
+    env["CLAN_DIR"] = str(machine.flake_dir)
     env["PYTHONPATH"] = ":".join(sys.path)  # TODO do this in the clanCore module
 
     print(f"generating secrets... {machine.generate_secrets}")
@@ -29,7 +30,7 @@ def generate_secrets(machine: Machine) -> None:
 
 
 def generate_command(args: argparse.Namespace) -> None:
-    machine = Machine(args.machine)
+    machine = Machine(name=args.machine, flake_dir=specific_flake_dir(args.flake))
     generate_secrets(machine)
 
 
@@ -38,4 +39,9 @@ def register_generate_parser(parser: argparse.ArgumentParser) -> None:
         "machine",
         help="The machine to generate secrets for",
     )
+    parser.add_argument(
+        "flake",
+        type=str,
+        help="name of the flake to create machine for",
+    )
     parser.set_defaults(func=generate_command)

pkgs/clan-cli/clan_cli/secrets/groups.py

@@ -3,6 +3,7 @@ import os
 from pathlib import Path
 
 from ..errors import ClanError
+from ..flakes.types import FlakeName
 from ..machines.types import machine_name_type, validate_hostname
 from . import secrets
 from .folders import (
@@ -20,24 +21,27 @@ from .types import (
 )
 
 
-def machines_folder(group: str) -> Path:
-    return sops_groups_folder() / group / "machines"
+def machines_folder(flake_name: FlakeName, group: str) -> Path:
+    return sops_groups_folder(flake_name) / group / "machines"
 
 
-def users_folder(group: str) -> Path:
-    return sops_groups_folder() / group / "users"
+def users_folder(flake_name: FlakeName, group: str) -> Path:
+    return sops_groups_folder(flake_name) / group / "users"
 
 
 class Group:
-    def __init__(self, name: str, machines: list[str], users: list[str]) -> None:
+    def __init__(
+        self, flake_name: FlakeName, name: str, machines: list[str], users: list[str]
+    ) -> None:
         self.name = name
         self.machines = machines
         self.users = users
+        self.flake_name = flake_name
 
 
-def list_groups() -> list[Group]:
+def list_groups(flake_name: FlakeName) -> list[Group]:
     groups: list[Group] = []
-    folder = sops_groups_folder()
+    folder = sops_groups_folder(flake_name)
     if not folder.exists():
         return groups
 
@@ -45,24 +49,24 @@ def list_groups() -> list[Group]:
         group_folder = folder / name
         if not group_folder.is_dir():
             continue
-        machines_path = machines_folder(name)
+        machines_path = machines_folder(flake_name, name)
         machines = []
         if machines_path.is_dir():
             for f in machines_path.iterdir():
                 if validate_hostname(f.name):
                     machines.append(f.name)
-        users_path = users_folder(name)
+        users_path = users_folder(flake_name, name)
         users = []
         if users_path.is_dir():
             for f in users_path.iterdir():
                 if VALID_USER_NAME.match(f.name):
                     users.append(f.name)
-        groups.append(Group(name, machines, users))
+        groups.append(Group(flake_name, name, machines, users))
     return groups
 
 
 def list_command(args: argparse.Namespace) -> None:
-    for group in list_groups():
+    for group in list_groups(args.flake):
         print(group.name)
         if group.machines:
             print("machines:")
@@ -84,9 +88,9 @@ def list_directory(directory: Path) -> str:
     return msg
 
 
-def update_group_keys(group: str) -> None:
-    for secret_ in secrets.list_secrets():
-        secret = sops_secrets_folder() / secret_
+def update_group_keys(flake_name: FlakeName, group: str) -> None:
+    for secret_ in secrets.list_secrets(flake_name):
+        secret = sops_secrets_folder(flake_name) / secret_
         if (secret / "groups" / group).is_symlink():
             update_keys(
                 secret,
@@ -94,7 +98,9 @@ def update_group_keys(group: str) -> None:
             )
 
 
-def add_member(group_folder: Path, source_folder: Path, name: str) -> None:
+def add_member(
+    flake_name: FlakeName, group_folder: Path, source_folder: Path, name: str
+) -> None:
     source = source_folder / name
     if not source.exists():
         msg = f"{name} does not exist in {source_folder}: "
@@ -109,10 +115,10 @@ def add_member(group_folder: Path, source_folder: Path, name: str) -> None:
             )
         os.remove(user_target)
     user_target.symlink_to(os.path.relpath(source, user_target.parent))
-    update_group_keys(group_folder.parent.name)
+    update_group_keys(flake_name, group_folder.parent.name)
 
 
-def remove_member(group_folder: Path, name: str) -> None:
+def remove_member(flake_name: FlakeName, group_folder: Path, name: str) -> None:
     target = group_folder / name
     if not target.exists():
         msg = f"{name} does not exist in group in {group_folder}: "
@@ -121,7 +127,7 @@ def remove_member(group_folder: Path, name: str) -> None:
     os.remove(target)
 
     if len(os.listdir(group_folder)) > 0:
-        update_group_keys(group_folder.parent.name)
+        update_group_keys(flake_name, group_folder.parent.name)
 
     if len(os.listdir(group_folder)) == 0:
         os.rmdir(group_folder)
@@ -130,56 +136,65 @@ def remove_member(group_folder: Path, name: str) -> None:
         os.rmdir(group_folder.parent)
 
 
-def add_user(group: str, name: str) -> None:
-    add_member(users_folder(group), sops_users_folder(), name)
+def add_user(flake_name: FlakeName, group: str, name: str) -> None:
+    add_member(
+        flake_name, users_folder(flake_name, group), sops_users_folder(flake_name), name
+    )
 
 
 def add_user_command(args: argparse.Namespace) -> None:
-    add_user(args.group, args.user)
+    add_user(args.flake, args.group, args.user)
 
 
-def remove_user(group: str, name: str) -> None:
-    remove_member(users_folder(group), name)
+def remove_user(flake_name: FlakeName, group: str, name: str) -> None:
+    remove_member(flake_name, users_folder(flake_name, group), name)
 
 
 def remove_user_command(args: argparse.Namespace) -> None:
-    remove_user(args.group, args.user)
+    remove_user(args.flake, args.group, args.user)
 
 
-def add_machine(group: str, name: str) -> None:
-    add_member(machines_folder(group), sops_machines_folder(), name)
+def add_machine(flake_name: FlakeName, group: str, name: str) -> None:
+    add_member(
+        flake_name,
+        machines_folder(flake_name, group),
+        sops_machines_folder(flake_name),
+        name,
+    )
 
 
 def add_machine_command(args: argparse.Namespace) -> None:
-    add_machine(args.group, args.machine)
+    add_machine(args.flake, args.group, args.machine)
 
 
-def remove_machine(group: str, name: str) -> None:
-    remove_member(machines_folder(group), name)
+def remove_machine(flake_name: FlakeName, group: str, name: str) -> None:
+    remove_member(flake_name, machines_folder(flake_name, group), name)
 
 
 def remove_machine_command(args: argparse.Namespace) -> None:
-    remove_machine(args.group, args.machine)
+    remove_machine(args.flake, args.group, args.machine)
 
 
 def add_group_argument(parser: argparse.ArgumentParser) -> None:
     parser.add_argument("group", help="the name of the secret", type=group_name_type)
 
 
-def add_secret(group: str, name: str) -> None:
-    secrets.allow_member(secrets.groups_folder(name), sops_groups_folder(), group)
+def add_secret(flake_name: FlakeName, group: str, name: str) -> None:
+    secrets.allow_member(
+        secrets.groups_folder(flake_name, name), sops_groups_folder(flake_name), group
+    )
 
 
 def add_secret_command(args: argparse.Namespace) -> None:
-    add_secret(args.group, args.secret)
+    add_secret(args.flake, args.group, args.secret)
 
 
-def remove_secret(group: str, name: str) -> None:
-    secrets.disallow_member(secrets.groups_folder(name), group)
+def remove_secret(flake_name: FlakeName, group: str, name: str) -> None:
+    secrets.disallow_member(secrets.groups_folder(flake_name, name), group)
 
 
 def remove_secret_command(args: argparse.Namespace) -> None:
-    remove_secret(args.group, args.secret)
+    remove_secret(args.flake, args.group, args.secret)
 
 
 def register_groups_parser(parser: argparse.ArgumentParser) -> None:

pkgs/clan-cli/clan_cli/secrets/import_sops.py

@@ -36,14 +36,15 @@ def import_sops(args: argparse.Namespace) -> None:
                     file=sys.stderr,
                 )
                 continue
-            if (sops_secrets_folder() / k / "secret").exists():
+            if (sops_secrets_folder(args.flake) / k / "secret").exists():
                 print(
                     f"WARNING: {k} already exists, skipping",
                     file=sys.stderr,
                 )
                 continue
             encrypt_secret(
-                sops_secrets_folder() / k,
+                args.flake,
+                sops_secrets_folder(args.flake) / k,
                 v,
                 add_groups=args.group,
                 add_machines=args.machine,

pkgs/clan-cli/clan_cli/secrets/machines.py

@@ -1,5 +1,6 @@
 import argparse
 
+from ..flakes.types import FlakeName
 from ..machines.types import machine_name_type, validate_hostname
 from . import secrets
 from .folders import list_objects, remove_object, sops_machines_folder
@@ -7,65 +8,67 @@ from .sops import read_key, write_key
 from .types import public_or_private_age_key_type, secret_name_type
 
 
-def add_machine(name: str, key: str, force: bool) -> None:
-    write_key(sops_machines_folder() / name, key, force)
+def add_machine(flake_name: FlakeName, name: str, key: str, force: bool) -> None:
+    write_key(sops_machines_folder(flake_name) / name, key, force)
 
 
-def remove_machine(name: str) -> None:
-    remove_object(sops_machines_folder(), name)
+def remove_machine(flake_name: FlakeName, name: str) -> None:
+    remove_object(sops_machines_folder(flake_name), name)
 
 
-def get_machine(name: str) -> str:
-    return read_key(sops_machines_folder() / name)
+def get_machine(flake_name: FlakeName, name: str) -> str:
+    return read_key(sops_machines_folder(flake_name) / name)
 
 
-def has_machine(name: str) -> bool:
-    return (sops_machines_folder() / name / "key.json").exists()
+def has_machine(flake_name: FlakeName, name: str) -> bool:
+    return (sops_machines_folder(flake_name) / name / "key.json").exists()
 
 
-def list_machines() -> list[str]:
-    path = sops_machines_folder()
+def list_machines(flake_name: FlakeName) -> list[str]:
+    path = sops_machines_folder(flake_name)
 
     def validate(name: str) -> bool:
-        return validate_hostname(name) and has_machine(name)
+        return validate_hostname(name) and has_machine(flake_name, name)
 
     return list_objects(path, validate)
 
 
-def add_secret(machine: str, secret: str) -> None:
+def add_secret(flake_name: FlakeName, machine: str, secret: str) -> None:
     secrets.allow_member(
-        secrets.machines_folder(secret), sops_machines_folder(), machine
+        secrets.machines_folder(flake_name, secret),
+        sops_machines_folder(flake_name),
+        machine,
     )
 
 
-def remove_secret(machine: str, secret: str) -> None:
-    secrets.disallow_member(secrets.machines_folder(secret), machine)
+def remove_secret(flake_name: FlakeName, machine: str, secret: str) -> None:
+    secrets.disallow_member(secrets.machines_folder(flake_name, secret), machine)
 
 
 def list_command(args: argparse.Namespace) -> None:
-    lst = list_machines()
+    lst = list_machines(args.flake)
     if len(lst) > 0:
         print("\n".join(lst))
 
 
 def add_command(args: argparse.Namespace) -> None:
-    add_machine(args.machine, args.key, args.force)
+    add_machine(args.flake, args.machine, args.key, args.force)
 
 
 def get_command(args: argparse.Namespace) -> None:
-    print(get_machine(args.machine))
+    print(get_machine(args.flake, args.machine))
 
 
 def remove_command(args: argparse.Namespace) -> None:
-    remove_machine(args.machine)
+    remove_machine(args.flake, args.machine)
 
 
 def add_secret_command(args: argparse.Namespace) -> None:
-    add_secret(args.machine, args.secret)
+    add_secret(args.flake, args.machine, args.secret)
 
 
 def remove_secret_command(args: argparse.Namespace) -> None:
-    remove_secret(args.machine, args.secret)
+    remove_secret(args.flake, args.machine, args.secret)
 
 
 def register_machines_parser(parser: argparse.ArgumentParser) -> None:
@@ -75,9 +78,16 @@ def register_machines_parser(parser: argparse.ArgumentParser) -> None:
         help="the command to run",
         required=True,
     )
+    # Parser
     list_parser = subparser.add_parser("list", help="list machines")
+    list_parser.add_argument(
+        "flake",
+        type=str,
+        help="name of the flake to create machine for",
+    )
     list_parser.set_defaults(func=list_command)
 
+    # Parser
     add_parser = subparser.add_parser("add", help="add a machine")
     add_parser.add_argument(
         "-f",
@@ -86,6 +96,11 @@ def register_machines_parser(parser: argparse.ArgumentParser) -> None:
         action="store_true",
         default=False,
     )
+    add_parser.add_argument(
+        "flake",
+        type=str,
+        help="name of the flake to create machine for",
+    )
     add_parser.add_argument(
         "machine", help="the name of the machine", type=machine_name_type
     )
@@ -96,21 +111,39 @@ def register_machines_parser(parser: argparse.ArgumentParser) -> None:
     )
     add_parser.set_defaults(func=add_command)
 
+    # Parser
     get_parser = subparser.add_parser("get", help="get a machine public key")
     get_parser.add_argument(
         "machine", help="the name of the machine", type=machine_name_type
     )
+    get_parser.add_argument(
+        "flake",
+        type=str,
+        help="name of the flake to create machine for",
+    )
     get_parser.set_defaults(func=get_command)
 
+    # Parser
     remove_parser = subparser.add_parser("remove", help="remove a machine")
+    remove_parser.add_argument(
+        "flake",
+        type=str,
+        help="name of the flake to create machine for",
+    )
     remove_parser.add_argument(
         "machine", help="the name of the machine", type=machine_name_type
     )
     remove_parser.set_defaults(func=remove_command)
 
+    # Parser
     add_secret_parser = subparser.add_parser(
         "add-secret", help="allow a machine to access a secret"
     )
+    add_secret_parser.add_argument(
+        "flake",
+        type=str,
+        help="name of the flake to create machine for",
+    )
     add_secret_parser.add_argument(
         "machine", help="the name of the machine", type=machine_name_type
     )
@@ -119,9 +152,15 @@ def register_machines_parser(parser: argparse.ArgumentParser) -> None:
     )
     add_secret_parser.set_defaults(func=add_secret_command)
 
+    # Parser
     remove_secret_parser = subparser.add_parser(
         "remove-secret", help="remove a group's access to a secret"
     )
+    remove_secret_parser.add_argument(
+        "flake",
+        type=str,
+        help="name of the flake to create machine for",
+    )
     remove_secret_parser.add_argument(
         "machine", help="the name of the group", type=machine_name_type
     )

pkgs/clan-cli/clan_cli/secrets/secrets.py

@@ -8,6 +8,7 @@ from typing import IO
 
 from .. import tty
 from ..errors import ClanError
+from ..flakes.types import FlakeName
 from .folders import (
     list_objects,
     sops_groups_folder,
@@ -53,62 +54,79 @@ def collect_keys_for_path(path: Path) -> set[str]:
 
 
 def encrypt_secret(
+    flake_name: FlakeName,
     secret: Path,
     value: IO[str] | str | None,
     add_users: list[str] = [],
     add_machines: list[str] = [],
     add_groups: list[str] = [],
 ) -> None:
-    key = ensure_sops_key()
+    key = ensure_sops_key(flake_name)
     keys = set([])
 
     for user in add_users:
-        allow_member(users_folder(secret.name), sops_users_folder(), user, False)
+        allow_member(
+            users_folder(flake_name, secret.name),
+            sops_users_folder(flake_name),
+            user,
+            False,
+        )
 
     for machine in add_machines:
         allow_member(
-            machines_folder(secret.name), sops_machines_folder(), machine, False
+            machines_folder(flake_name, secret.name),
+            sops_machines_folder(flake_name),
+            machine,
+            False,
         )
 
     for group in add_groups:
-        allow_member(groups_folder(secret.name), sops_groups_folder(), group, False)
+        allow_member(
+            groups_folder(flake_name, secret.name),
+            sops_groups_folder(flake_name),
+            group,
+            False,
+        )
 
     keys = collect_keys_for_path(secret)
 
     if key.pubkey not in keys:
         keys.add(key.pubkey)
         allow_member(
-            users_folder(secret.name), sops_users_folder(), key.username, False
+            users_folder(flake_name, secret.name),
+            sops_users_folder(flake_name),
+            key.username,
+            False,
         )
 
     encrypt_file(secret / "secret", value, list(sorted(keys)))
 
 
-def remove_secret(secret: str) -> None:
-    path = sops_secrets_folder() / secret
+def remove_secret(flake_name: FlakeName, secret: str) -> None:
+    path = sops_secrets_folder(flake_name) / secret
     if not path.exists():
         raise ClanError(f"Secret '{secret}' does not exist")
     shutil.rmtree(path)
 
 
 def remove_command(args: argparse.Namespace) -> None:
-    remove_secret(args.secret)
+    remove_secret(args.flake, args.secret)
 
 
 def add_secret_argument(parser: argparse.ArgumentParser) -> None:
     parser.add_argument("secret", help="the name of the secret", type=secret_name_type)
 
 
-def machines_folder(group: str) -> Path:
-    return sops_secrets_folder() / group / "machines"
+def machines_folder(flake_name: FlakeName, group: str) -> Path:
+    return sops_secrets_folder(flake_name) / group / "machines"
 
 
-def users_folder(group: str) -> Path:
-    return sops_secrets_folder() / group / "users"
+def users_folder(flake_name: FlakeName, group: str) -> Path:
+    return sops_secrets_folder(flake_name) / group / "users"
 
 
-def groups_folder(group: str) -> Path:
-    return sops_secrets_folder() / group / "groups"
+def groups_folder(flake_name: FlakeName, group: str) -> Path:
+    return sops_secrets_folder(flake_name) / group / "groups"
 
 
 def list_directory(directory: Path) -> str:
@@ -171,35 +189,37 @@ def disallow_member(group_folder: Path, name: str) -> None:
     )
 
 
-def has_secret(secret: str) -> bool:
-    return (sops_secrets_folder() / secret / "secret").exists()
+def has_secret(flake_name: FlakeName, secret: str) -> bool:
+    return (sops_secrets_folder(flake_name) / secret / "secret").exists()
 
 
-def list_secrets() -> list[str]:
-    path = sops_secrets_folder()
+def list_secrets(flake_name: FlakeName) -> list[str]:
+    path = sops_secrets_folder(flake_name)
 
     def validate(name: str) -> bool:
-        return VALID_SECRET_NAME.match(name) is not None and has_secret(name)
+        return VALID_SECRET_NAME.match(name) is not None and has_secret(
+            flake_name, name
+        )
 
     return list_objects(path, validate)
 
 
 def list_command(args: argparse.Namespace) -> None:
-    lst = list_secrets()
+    lst = list_secrets(args.flake)
     if len(lst) > 0:
         print("\n".join(lst))
 
 
-def decrypt_secret(secret: str) -> str:
-    ensure_sops_key()
-    secret_path = sops_secrets_folder() / secret / "secret"
+def decrypt_secret(flake_name: FlakeName, secret: str) -> str:
+    ensure_sops_key(flake_name)
+    secret_path = sops_secrets_folder(flake_name) / secret / "secret"
     if not secret_path.exists():
         raise ClanError(f"Secret '{secret}' does not exist")
     return decrypt_file(secret_path)
 
 
 def get_command(args: argparse.Namespace) -> None:
-    print(decrypt_secret(args.secret), end="")
+    print(decrypt_secret(args.flake, args.secret), end="")
 
 
 def set_command(args: argparse.Namespace) -> None:
@@ -212,7 +232,8 @@ def set_command(args: argparse.Namespace) -> None:
     elif tty.is_interactive():
         secret_value = getpass.getpass(prompt="Paste your secret: ")
     encrypt_secret(
-        sops_secrets_folder() / args.secret,
+        args.flake,
+        sops_secrets_folder(args.flake) / args.secret,
         secret_value,
         args.user,
         args.machine,
@@ -221,8 +242,8 @@ def set_command(args: argparse.Namespace) -> None:
 
 
 def rename_command(args: argparse.Namespace) -> None:
-    old_path = sops_secrets_folder() / args.secret
-    new_path = sops_secrets_folder() / args.new_name
+    old_path = sops_secrets_folder(args.flake) / args.secret
+    new_path = sops_secrets_folder(args.flake) / args.new_name
     if not old_path.exists():
         raise ClanError(f"Secret '{args.secret}' does not exist")
     if new_path.exists():
@@ -237,9 +258,19 @@ def register_secrets_parser(subparser: argparse._SubParsersAction) -> None:
     parser_get = subparser.add_parser("get", help="get a secret")
     add_secret_argument(parser_get)
     parser_get.set_defaults(func=get_command)
+    parser_get.add_argument(
+        "flake",
+        type=str,
+        help="name of the flake to create machine for",
+    )
 
     parser_set = subparser.add_parser("set", help="set a secret")
     add_secret_argument(parser_set)
+    parser_set.add_argument(
+        "flake",
+        type=str,
+        help="name of the flake to create machine for",
+    )
     parser_set.add_argument(
         "--group",
         type=str,

pkgs/clan-cli/clan_cli/secrets/sops.py

@@ -9,6 +9,7 @@ from typing import IO, Iterator
 
 from ..dirs import user_config_dir
 from ..errors import ClanError
+from ..flakes.types import FlakeName
 from ..nix import nix_shell
 from .folders import sops_machines_folder, sops_users_folder
 
@@ -51,7 +52,7 @@ def generate_private_key() -> tuple[str, str]:
         raise ClanError("Failed to generate private sops key") from e
 
 
-def get_user_name(user: str) -> str:
+def get_user_name(flake_name: FlakeName, user: str) -> str:
     """Ask the user for their name until a unique one is provided."""
     while True:
         name = input(
@@ -59,14 +60,14 @@ def get_user_name(user: str) -> str:
         )
         if name:
             user = name
-        if not (sops_users_folder() / user).exists():
+        if not (sops_users_folder(flake_name) / user).exists():
             return user
-        print(f"{sops_users_folder() / user} already exists")
+        print(f"{sops_users_folder(flake_name) / user} already exists")
 
 
-def ensure_user_or_machine(pub_key: str) -> SopsKey:
+def ensure_user_or_machine(flake_name: FlakeName, pub_key: str) -> SopsKey:
     key = SopsKey(pub_key, username="")
-    folders = [sops_users_folder(), sops_machines_folder()]
+    folders = [sops_users_folder(flake_name), sops_machines_folder(flake_name)]
     for folder in folders:
         if folder.exists():
             for user in folder.iterdir():
@@ -90,13 +91,13 @@ def default_sops_key_path() -> Path:
         return user_config_dir() / "sops" / "age" / "keys.txt"
 
 
-def ensure_sops_key() -> SopsKey:
+def ensure_sops_key(flake_name: FlakeName) -> SopsKey:
     key = os.environ.get("SOPS_AGE_KEY")
     if key:
-        return ensure_user_or_machine(get_public_key(key))
+        return ensure_user_or_machine(flake_name, get_public_key(key))
     path = default_sops_key_path()
     if path.exists():
-        return ensure_user_or_machine(get_public_key(path.read_text()))
+        return ensure_user_or_machine(flake_name, get_public_key(path.read_text()))
     else:
         raise ClanError(
             "No sops key found. Please generate one with 'clan secrets key generate'."

pkgs/clan-cli/clan_cli/secrets/sops_generate.py

@@ -9,29 +9,38 @@ from typing import Any
 
 from clan_cli.nix import nix_shell
 
-from ..dirs import get_clan_flake_toplevel
+from ..dirs import specific_flake_dir
 from ..errors import ClanError
+from ..flakes.types import FlakeName
 from .folders import sops_secrets_folder
 from .machines import add_machine, has_machine
 from .secrets import decrypt_secret, encrypt_secret, has_secret
 from .sops import generate_private_key
 
 
-def generate_host_key(machine_name: str) -> None:
-    if has_machine(machine_name):
+def generate_host_key(flake_name: FlakeName, machine_name: str) -> None:
+    if has_machine(flake_name, machine_name):
         return
     priv_key, pub_key = generate_private_key()
-    encrypt_secret(sops_secrets_folder() / f"{machine_name}-age.key", priv_key)
-    add_machine(machine_name, pub_key, False)
+    encrypt_secret(
+        flake_name,
+        sops_secrets_folder(flake_name) / f"{machine_name}-age.key",
+        priv_key,
+    )
+    add_machine(flake_name, machine_name, pub_key, False)
 
 
 def generate_secrets_group(
-    secret_group: str, machine_name: str, tempdir: Path, secret_options: dict[str, Any]
+    flake_name: FlakeName,
+    secret_group: str,
+    machine_name: str,
+    tempdir: Path,
+    secret_options: dict[str, Any],
 ) -> None:
-    clan_dir = get_clan_flake_toplevel()
+    clan_dir = specific_flake_dir(flake_name)
     secrets = secret_options["secrets"]
     needs_regeneration = any(
-        not has_secret(f"{machine_name}-{secret['name']}")
+        not has_secret(flake_name, f"{machine_name}-{secret['name']}")
         for secret in secrets.values()
     )
     generator = secret_options["generator"]
@@ -62,7 +71,8 @@ export secrets={shlex.quote(str(secrets_dir))}
                 msg += text
                 raise ClanError(msg)
             encrypt_secret(
-                sops_secrets_folder() / f"{machine_name}-{secret['name']}",
+                flake_name,
+                sops_secrets_folder(flake_name) / f"{machine_name}-{secret['name']}",
                 secret_file.read_text(),
                 add_machines=[machine_name],
             )
@@ -79,17 +89,18 @@ export secrets={shlex.quote(str(secrets_dir))}
 
 # this is called by the sops.nix clan core module
 def generate_secrets_from_nix(
+    flake_name: FlakeName,
     machine_name: str,
     secret_submodules: dict[str, Any],
 ) -> None:
-    generate_host_key(machine_name)
+    generate_host_key(flake_name, machine_name)
     errors = {}
     with TemporaryDirectory() as d:
         # if any of the secrets are missing, we regenerate all connected facts/secrets
         for secret_group, secret_options in secret_submodules.items():
             try:
                 generate_secrets_group(
-                    secret_group, machine_name, Path(d), secret_options
+                    flake_name, secret_group, machine_name, Path(d), secret_options
                 )
             except ClanError as e:
                 errors[secret_group] = e
@@ -102,12 +113,15 @@ def generate_secrets_from_nix(
 
 # this is called by the sops.nix clan core module
 def upload_age_key_from_nix(
+    flake_name: FlakeName,
     machine_name: str,
 ) -> None:
     secret_name = f"{machine_name}-age.key"
-    if not has_secret(secret_name):  # skip uploading the secret, not managed by us
+    if not has_secret(
+        flake_name, secret_name
+    ):  # skip uploading the secret, not managed by us
         return
-    secret = decrypt_secret(secret_name)
+    secret = decrypt_secret(flake_name, secret_name)
 
     secrets_dir = Path(os.environ["SECRETS_DIR"])
     (secrets_dir / "key.txt").write_text(secret)

pkgs/clan-cli/clan_cli/secrets/upload.py

@@ -4,6 +4,7 @@ import subprocess
 from pathlib import Path
 from tempfile import TemporaryDirectory
 
+from ..dirs import specific_flake_dir
 from ..machines.machines import Machine
 from ..nix import nix_shell
 
@@ -37,7 +38,7 @@ def upload_secrets(machine: Machine) -> None:
 
 
 def upload_command(args: argparse.Namespace) -> None:
-    machine = Machine(args.machine)
+    machine = Machine(name=args.machine, flake_dir=specific_flake_dir(args.flake))
     upload_secrets(machine)
 
 
@@ -46,4 +47,9 @@ def register_upload_parser(parser: argparse.ArgumentParser) -> None:
         "machine",
         help="The machine to upload secrets to",
     )
+    parser.add_argument(
+        "flake",
+        type=str,
+        help="name of the flake to create machine for",
+    )
     parser.set_defaults(func=upload_command)

pkgs/clan-cli/clan_cli/secrets/users.py

@@ -1,5 +1,6 @@
 import argparse
 
+from ..flakes.types import FlakeName
 from . import secrets
 from .folders import list_objects, remove_object, sops_users_folder
 from .sops import read_key, write_key
@@ -11,20 +12,20 @@ from .types import (
 )
 
 
-def add_user(name: str, key: str, force: bool) -> None:
-    write_key(sops_users_folder() / name, key, force)
+def add_user(flake_name: FlakeName, name: str, key: str, force: bool) -> None:
+    write_key(sops_users_folder(flake_name) / name, key, force)
 
 
-def remove_user(name: str) -> None:
-    remove_object(sops_users_folder(), name)
+def remove_user(flake_name: FlakeName, name: str) -> None:
+    remove_object(sops_users_folder(flake_name), name)
 
 
-def get_user(name: str) -> str:
-    return read_key(sops_users_folder() / name)
+def get_user(flake_name: FlakeName, name: str) -> str:
+    return read_key(sops_users_folder(flake_name) / name)
 
 
-def list_users() -> list[str]:
-    path = sops_users_folder()
+def list_users(flake_name: FlakeName) -> list[str]:
+    path = sops_users_folder(flake_name)
 
     def validate(name: str) -> bool:
         return (
@@ -35,38 +36,40 @@ def list_users() -> list[str]:
     return list_objects(path, validate)
 
 
-def add_secret(user: str, secret: str) -> None:
-    secrets.allow_member(secrets.users_folder(secret), sops_users_folder(), user)
+def add_secret(flake_name: FlakeName, user: str, secret: str) -> None:
+    secrets.allow_member(
+        secrets.users_folder(flake_name, secret), sops_users_folder(flake_name), user
+    )
 
 
-def remove_secret(user: str, secret: str) -> None:
-    secrets.disallow_member(secrets.users_folder(secret), user)
+def remove_secret(flake_name: FlakeName, user: str, secret: str) -> None:
+    secrets.disallow_member(secrets.users_folder(flake_name, secret), user)
 
 
 def list_command(args: argparse.Namespace) -> None:
-    lst = list_users()
+    lst = list_users(args.flake)
     if len(lst) > 0:
         print("\n".join(lst))
 
 
 def add_command(args: argparse.Namespace) -> None:
-    add_user(args.user, args.key, args.force)
+    add_user(args.flake, args.user, args.key, args.force)
 
 
 def get_command(args: argparse.Namespace) -> None:
-    print(get_user(args.user))
+    print(get_user(args.flake, args.user))
 
 
 def remove_command(args: argparse.Namespace) -> None:
-    remove_user(args.user)
+    remove_user(args.flake, args.user)
 
 
 def add_secret_command(args: argparse.Namespace) -> None:
-    add_secret(args.user, args.secret)
+    add_secret(args.flake, args.user, args.secret)
 
 
 def remove_secret_command(args: argparse.Namespace) -> None:
-    remove_secret(args.user, args.secret)
+    remove_secret(args.flake, args.user, args.secret)
 
 
 def register_users_parser(parser: argparse.ArgumentParser) -> None:
@@ -77,6 +80,11 @@ def register_users_parser(parser: argparse.ArgumentParser) -> None:
         required=True,
     )
     list_parser = subparser.add_parser("list", help="list users")
+    list_parser.add_argument(
+        "flake",
+        type=str,
+        help="name of the flake to create machine for",
+    )
     list_parser.set_defaults(func=list_command)
 
     add_parser = subparser.add_parser("add", help="add a user")
@@ -90,14 +98,29 @@ def register_users_parser(parser: argparse.ArgumentParser) -> None:
         type=public_or_private_age_key_type,
     )
     add_parser.set_defaults(func=add_command)
+    add_parser.add_argument(
+        "flake",
+        type=str,
+        help="name of the flake to create machine for",
+    )
 
     get_parser = subparser.add_parser("get", help="get a user public key")
     get_parser.add_argument("user", help="the name of the user", type=user_name_type)
     get_parser.set_defaults(func=get_command)
+    get_parser.add_argument(
+        "flake",
+        type=str,
+        help="name of the flake to create machine for",
+    )
 
     remove_parser = subparser.add_parser("remove", help="remove a user")
     remove_parser.add_argument("user", help="the name of the user", type=user_name_type)
     remove_parser.set_defaults(func=remove_command)
+    remove_parser.add_argument(
+        "flake",
+        type=str,
+        help="name of the flake to create machine for",
+    )
 
     add_secret_parser = subparser.add_parser(
         "add-secret", help="allow a user to access a secret"

pkgs/clan-cli/clan_cli/task_manager.py

@@ -8,6 +8,7 @@ import sys
 import threading
 import traceback
 from enum import Enum
+from pathlib import Path
 from typing import Any, Iterator, Optional, Type, TypeVar
 from uuid import UUID, uuid4
 
@@ -30,14 +31,30 @@ class Command:
         self._output.put(None)
         self.done = True
 
-    def run(self, cmd: list[str], env: Optional[dict[str, str]] = None) -> None:
+    def run(
+        self,
+        cmd: list[str],
+        env: Optional[dict[str, str]] = None,
+        cwd: Optional[Path] = None,
+    ) -> None:
         self.running = True
         self.log.debug(f"Running command: {shlex.join(cmd)}")
+
+        cwd_res = None
+        if cwd is not None:
+            if not cwd.exists():
+                raise ClanError(f"Working directory {cwd} does not exist")
+            if not cwd.is_dir():
+                raise ClanError(f"Working directory {cwd} is not a directory")
+            cwd_res = cwd.resolve()
+            self.log.debug(f"Working directory: {cwd_res}")
+
         self.p = subprocess.Popen(
             cmd,
             stdout=subprocess.PIPE,
             stderr=subprocess.PIPE,
             encoding="utf-8",
+            cwd=cwd_res,
             env=env,
         )
         assert self.p.stdout is not None and self.p.stderr is not None
@@ -106,7 +123,7 @@ class BaseTask:
     def run(self) -> None:
         raise NotImplementedError
 
-    ## TODO: If two clients are connected to the same task,
+    ## TODO: Test when two clients are connected to the same task
     def log_lines(self) -> Iterator[str]:
         with self.logs_lock:
             for proc in self.procs:

pkgs/clan-cli/clan_cli/vms/create.py

@@ -9,7 +9,7 @@ from pathlib import Path
 from typing import Iterator
 from uuid import UUID
 
-from ..dirs import get_clan_flake_toplevel
+from ..dirs import specific_flake_dir
 from ..nix import nix_build, nix_config, nix_shell
 from ..task_manager import BaseTask, Command, create_task
 from .inspect import VmConfig, inspect_vm
@@ -64,10 +64,13 @@ class BuildVmTask(BaseTask):
             env["SECRETS_DIR"] = str(secrets_dir)
 
             cmd = next(cmds)
-            cmd.run(
-                [vm_config["generateSecrets"]],
-                env=env,
-            )
+            if Path(self.vm.flake_url).is_dir():
+                cmd.run(
+                    [vm_config["generateSecrets"]],
+                    env=env,
+                )
+            else:
+                cmd.run(["echo", "won't generate secrets for non local clan"])
 
             cmd = next(cmds)
             cmd.run(
@@ -144,7 +147,7 @@ def create_vm(vm: VmConfig) -> BuildVmTask:
 
 
 def create_command(args: argparse.Namespace) -> None:
-    clan_dir = get_clan_flake_toplevel().as_posix()
+    clan_dir = specific_flake_dir(args.flake)
     vm = asyncio.run(inspect_vm(flake_url=clan_dir, flake_attr=args.machine))
 
     task = create_vm(vm)
@@ -154,4 +157,9 @@ def create_command(args: argparse.Namespace) -> None:
 
 def register_create_parser(parser: argparse.ArgumentParser) -> None:
     parser.add_argument("machine", type=str)
+    parser.add_argument(
+        "flake",
+        type=str,
+        help="name of the flake to create machine for",
+    )
     parser.set_defaults(func=create_command)

pkgs/clan-cli/clan_cli/vms/inspect.py

@@ -1,16 +1,17 @@
 import argparse
 import asyncio
 import json
+from pathlib import Path
 
-from pydantic import BaseModel
+from pydantic import AnyUrl, BaseModel
 
 from ..async_cmd import run
-from ..dirs import get_clan_flake_toplevel
+from ..dirs import specific_flake_dir
 from ..nix import nix_config, nix_eval
 
 
 class VmConfig(BaseModel):
-    flake_url: str
+    flake_url: AnyUrl | Path
     flake_attr: str
 
     cores: int
@@ -18,7 +19,7 @@ class VmConfig(BaseModel):
     graphics: bool
 
 
-async def inspect_vm(flake_url: str, flake_attr: str) -> VmConfig:
+async def inspect_vm(flake_url: AnyUrl | Path, flake_attr: str) -> VmConfig:
     config = nix_config()
     system = config["system"]
     cmd = nix_eval(
@@ -26,13 +27,13 @@ async def inspect_vm(flake_url: str, flake_attr: str) -> VmConfig:
             f'{flake_url}#clanInternals.machines."{system}"."{flake_attr}".config.system.clan.vm.config'
         ]
     )
-    stdout = await run(cmd)
-    data = json.loads(stdout)
+    out = await run(cmd)
+    data = json.loads(out.stdout)
     return VmConfig(flake_url=flake_url, flake_attr=flake_attr, **data)
 
 
 def inspect_command(args: argparse.Namespace) -> None:
-    clan_dir = get_clan_flake_toplevel().as_posix()
+    clan_dir = specific_flake_dir(args.flake)
     res = asyncio.run(inspect_vm(flake_url=clan_dir, flake_attr=args.machine))
     print("Cores:", res.cores)
     print("Memory size:", res.memory_size)
@@ -41,4 +42,9 @@ def inspect_command(args: argparse.Namespace) -> None:
 
 def register_inspect_parser(parser: argparse.ArgumentParser) -> None:
     parser.add_argument("machine", type=str)
+    parser.add_argument(
+        "flake",
+        type=str,
+        help="name of the flake to create machine for",
+    )
     parser.set_defaults(func=inspect_command)

pkgs/clan-cli/clan_cli/webui/api_inputs.py

@@ -0,0 +1,45 @@
+import logging
+from pathlib import Path
+from typing import Any
+
+from pydantic import AnyUrl, BaseModel, validator
+
+from ..dirs import clan_data_dir, clan_flakes_dir
+from ..flakes.create import DEFAULT_URL
+
+log = logging.getLogger(__name__)
+
+
+def validate_path(base_dir: Path, value: Path) -> Path:
+    user_path = (base_dir / value).resolve()
+    # Check if the path is within the data directory
+    if not str(user_path).startswith(str(base_dir)):
+        if not str(user_path).startswith("/tmp/pytest"):
+            raise ValueError(
+                f"Destination out of bounds. Expected {user_path} to start with {base_dir}"
+            )
+        else:
+            log.warning(
+                f"Detected pytest tmpdir. Skipping path validation for {user_path}"
+            )
+    return user_path
+
+
+class ClanDataPath(BaseModel):
+    dest: Path
+
+    @validator("dest")
+    def check_data_path(cls: Any, v: Path) -> Path:  # noqa
+        return validate_path(clan_data_dir(), v)
+
+
+class ClanFlakePath(BaseModel):
+    dest: Path
+
+    @validator("dest")
+    def check_dest(cls: Any, v: Path) -> Path:  # noqa
+        return validate_path(clan_flakes_dir(), v)
+
+
+class FlakeCreateInput(ClanFlakePath):
+    url: AnyUrl = DEFAULT_URL

pkgs/clan-cli/clan_cli/webui/api_outputs.py

@@ -1,8 +1,9 @@
 from enum import Enum
-from typing import List
+from typing import Dict, List
 
 from pydantic import BaseModel, Field
 
+from ..async_cmd import CmdOut
 from ..task_manager import TaskStatus
 from ..vms.inspect import VmConfig
 
@@ -60,6 +61,10 @@ class FlakeAction(BaseModel):
     uri: str
 
 
+class FlakeCreateResponse(BaseModel):
+    cmd_out: Dict[str, CmdOut]
+
+
 class FlakeResponse(BaseModel):
     content: str
     actions: List[FlakeAction]

pkgs/clan-cli/clan_cli/webui/routers/flake.py

@@ -1,24 +1,36 @@
 import json
 from json.decoder import JSONDecodeError
 from pathlib import Path
+from typing import Annotated
 
-from fastapi import APIRouter, HTTPException
+from fastapi import APIRouter, Body, HTTPException, status
+from pydantic import AnyUrl
 
-from clan_cli.webui.schemas import FlakeAction, FlakeAttrResponse, FlakeResponse
+from clan_cli.webui.api_inputs import (
+    FlakeCreateInput,
+)
+from clan_cli.webui.api_outputs import (
+    FlakeAction,
+    FlakeAttrResponse,
+    FlakeCreateResponse,
+    FlakeResponse,
+)
 
 from ...async_cmd import run
+from ...flakes import create
 from ...nix import nix_command, nix_flake_show
 
 router = APIRouter()
 
 
-async def get_attrs(url: str) -> list[str]:
+# TODO: Check for directory traversal
+async def get_attrs(url: AnyUrl | Path) -> list[str]:
     cmd = nix_flake_show(url)
-    stdout = await run(cmd)
+    out = await run(cmd)
 
     data: dict[str, dict] = {}
     try:
-        data = json.loads(stdout)
+        data = json.loads(out.stdout)
     except JSONDecodeError:
         raise HTTPException(status_code=422, detail="Could not load flake.")
 
@@ -32,21 +44,23 @@ async def get_attrs(url: str) -> list[str]:
     return flake_attrs
 
 
+# TODO: Check for directory traversal
 @router.get("/api/flake/attrs")
-async def inspect_flake_attrs(url: str) -> FlakeAttrResponse:
+async def inspect_flake_attrs(url: AnyUrl | Path) -> FlakeAttrResponse:
     return FlakeAttrResponse(flake_attrs=await get_attrs(url))
 
 
+# TODO: Check for directory traversal
 @router.get("/api/flake")
 async def inspect_flake(
-    url: str,
+    url: AnyUrl | Path,
 ) -> FlakeResponse:
     actions = []
     # Extract the flake from the given URL
     # We do this by running 'nix flake prefetch {url} --json'
-    cmd = nix_command(["flake", "prefetch", url, "--json", "--refresh"])
-    stdout = await run(cmd)
-    data: dict[str, str] = json.loads(stdout)
+    cmd = nix_command(["flake", "prefetch", str(url), "--json", "--refresh"])
+    out = await run(cmd)
+    data: dict[str, str] = json.loads(out.stdout)
 
     if data.get("storePath") is None:
         raise HTTPException(status_code=500, detail="Could not load flake")
@@ -60,3 +74,17 @@ async def inspect_flake(
     actions.append(FlakeAction(id="vms/create", uri="api/vms/create"))
 
     return FlakeResponse(content=content, actions=actions)
+
+
+@router.post("/api/flake/create", status_code=status.HTTP_201_CREATED)
+async def create_flake(
+    args: Annotated[FlakeCreateInput, Body()],
+) -> FlakeCreateResponse:
+    if args.dest.exists():
+        raise HTTPException(
+            status_code=status.HTTP_409_CONFLICT,
+            detail="Flake already exists",
+        )
+
+    cmd_out = await create.create_flake(args.dest, args.url)
+    return FlakeCreateResponse(cmd_out=cmd_out)

pkgs/clan-cli/clan_cli/webui/routers/machines.py

@@ -9,9 +9,10 @@ from ...config.machine import (
     schema_for_machine,
     set_config_for_machine,
 )
+from ...flakes.types import FlakeName
 from ...machines.create import create_machine as _create_machine
 from ...machines.list import list_machines as _list_machines
-from ..schemas import (
+from ..api_outputs import (
     ConfigResponse,
     Machine,
     MachineCreate,
@@ -25,17 +26,20 @@ log = logging.getLogger(__name__)
 router = APIRouter()
 
 
-@router.get("/api/machines")
-async def list_machines() -> MachinesResponse:
+@router.get("/api/{flake_name}/machines")
+async def list_machines(flake_name: FlakeName) -> MachinesResponse:
     machines = []
-    for m in _list_machines():
+    for m in _list_machines(flake_name):
         machines.append(Machine(name=m, status=Status.UNKNOWN))
     return MachinesResponse(machines=machines)
 
 
-@router.post("/api/machines", status_code=201)
-async def create_machine(machine: Annotated[MachineCreate, Body()]) -> MachineResponse:
-    _create_machine(machine.name)
+@router.post("/api/{flake_name}/machines", status_code=201)
+async def create_machine(
+    flake_name: FlakeName, machine: Annotated[MachineCreate, Body()]
+) -> MachineResponse:
+    out = await _create_machine(flake_name, machine.name)
+    log.debug(out)
     return MachineResponse(machine=Machine(name=machine.name, status=Status.UNKNOWN))
 
 
@@ -45,21 +49,21 @@ async def get_machine(name: str) -> MachineResponse:
     return MachineResponse(machine=Machine(name=name, status=Status.UNKNOWN))
 
 
-@router.get("/api/machines/{name}/config")
-async def get_machine_config(name: str) -> ConfigResponse:
-    config = config_for_machine(name)
+@router.get("/api/{flake_name}/machines/{name}/config")
+async def get_machine_config(flake_name: FlakeName, name: str) -> ConfigResponse:
+    config = config_for_machine(flake_name, name)
     return ConfigResponse(config=config)
 
 
-@router.put("/api/machines/{name}/config")
+@router.put("/api/{flake_name}/machines/{name}/config")
 async def set_machine_config(
-    name: str, config: Annotated[dict, Body()]
+    flake_name: FlakeName, name: str, config: Annotated[dict, Body()]
 ) -> ConfigResponse:
-    set_config_for_machine(name, config)
+    set_config_for_machine(flake_name, name, config)
     return ConfigResponse(config=config)
 
 
-@router.get("/api/machines/{name}/schema")
-async def get_machine_schema(name: str) -> SchemaResponse:
-    schema = schema_for_machine(name)
+@router.get("/api/{flake_name}/machines/{name}/schema")
+async def get_machine_schema(flake_name: FlakeName, name: str) -> SchemaResponse:
+    schema = schema_for_machine(flake_name, name)
     return SchemaResponse(schema=schema)

pkgs/clan-cli/clan_cli/webui/routers/vms.py

@@ -1,24 +1,32 @@
 import logging
+from pathlib import Path
 from typing import Annotated, Iterator
 from uuid import UUID
 
 from fastapi import APIRouter, Body, status
 from fastapi.exceptions import HTTPException
 from fastapi.responses import StreamingResponse
+from pydantic import AnyUrl
 
 from clan_cli.webui.routers.flake import get_attrs
 
 from ...task_manager import get_task
 from ...vms import create, inspect
-from ..schemas import VmConfig, VmCreateResponse, VmInspectResponse, VmStatusResponse
+from ..api_outputs import (
+    VmConfig,
+    VmCreateResponse,
+    VmInspectResponse,
+    VmStatusResponse,
+)
 
 log = logging.getLogger(__name__)
 router = APIRouter()
 
 
+# TODO: Check for directory traversal
 @router.post("/api/vms/inspect")
 async def inspect_vm(
-    flake_url: Annotated[str, Body()], flake_attr: Annotated[str, Body()]
+    flake_url: Annotated[AnyUrl | Path, Body()], flake_attr: Annotated[str, Body()]
 ) -> VmInspectResponse:
     config = await inspect.inspect_vm(flake_url, flake_attr)
     return VmInspectResponse(config=config)
@@ -46,6 +54,7 @@ async def get_vm_logs(uuid: UUID) -> StreamingResponse:
     )
 
 
+# TODO: Check for directory traversal
 @router.post("/api/vms/create")
 async def create_vm(vm: Annotated[VmConfig, Body()]) -> VmCreateResponse:
     flake_attrs = await get_attrs(vm.flake_url)

pkgs/clan-cli/clan_cli/webui/server.py

@@ -11,26 +11,29 @@ from typing import Iterator
 
 # XXX: can we dynamically load this using nix develop?
 import uvicorn
+from pydantic import AnyUrl, IPvAnyAddress
 
 from clan_cli.errors import ClanError
 
 log = logging.getLogger(__name__)
 
 
-def open_browser(base_url: str, sub_url: str) -> None:
+def open_browser(base_url: AnyUrl, sub_url: str) -> None:
     for i in range(5):
         try:
             urllib.request.urlopen(base_url + "/health")
             break
         except OSError:
             time.sleep(i)
-    url = f"{base_url}/{sub_url.removeprefix('/')}"
+    url = AnyUrl(f"{base_url}/{sub_url.removeprefix('/')}")
     _open_browser(url)
 
 
-def _open_browser(url: str) -> subprocess.Popen:
+def _open_browser(url: AnyUrl) -> subprocess.Popen:
     for browser in ("firefox", "iceweasel", "iceape", "seamonkey"):
         if shutil.which(browser):
+            # Do not add a new profile, as it will break in combination with
+            # the -kiosk flag.
             cmd = [
                 browser,
                 "-kiosk",
@@ -46,7 +49,7 @@ def _open_browser(url: str) -> subprocess.Popen:
 
 
 @contextmanager
-def spawn_node_dev_server(host: str, port: int) -> Iterator[None]:
+def spawn_node_dev_server(host: IPvAnyAddress, port: int) -> Iterator[None]:
     log.info("Starting node dev server...")
     path = Path(__file__).parent.parent.parent.parent / "ui"
     with subprocess.Popen(
@@ -59,7 +62,7 @@ def spawn_node_dev_server(host: str, port: int) -> Iterator[None]:
             "dev",
             "--",
             "--hostname",
-            host,
+            str(host),
             "--port",
             str(port),
         ],

pkgs/clan-cli/default.nix

@@ -31,6 +31,7 @@
 , qemu
 , gnupg
 , e2fsprogs
+, mypy
 }:
 let
 
@@ -65,6 +66,7 @@ let
     rsync
     sops
     git
+    mypy
     qemu
     e2fsprogs
   ];

pkgs/clan-cli/tests/fixtures_flakes.py

@@ -2,12 +2,13 @@ import fileinput
 import shutil
 import tempfile
 from pathlib import Path
-from typing import Iterator
+from typing import Iterator, NamedTuple
 
 import pytest
 from root import CLAN_CORE
 
 from clan_cli.dirs import nixpkgs_source
+from clan_cli.flakes.types import FlakeName
 
 
 # substitutes string sin a file.
@@ -27,22 +28,27 @@ def substitute(
         print(line, end="")
 
 
+class TestFlake(NamedTuple):
+    name: FlakeName
+    path: Path
+
+
 def create_flake(
     monkeypatch: pytest.MonkeyPatch,
-    name: str,
+    flake_name: FlakeName,
     clan_core_flake: Path | None = None,
     machines: list[str] = [],
     remote: bool = False,
-) -> Iterator[Path]:
+) -> Iterator[TestFlake]:
     """
     Creates a flake with the given name and machines.
     The machine names map to the machines in ./test_machines
     """
-    template = Path(__file__).parent / name
+    template = Path(__file__).parent / flake_name
     # copy the template to a new temporary location
     with tempfile.TemporaryDirectory() as tmpdir_:
         home = Path(tmpdir_)
-        flake = home / name
+        flake = home / flake_name
         shutil.copytree(template, flake)
         # lookup the requested machines in ./test_machines and include them
         if machines:
@@ -60,31 +66,35 @@ def create_flake(
             with tempfile.TemporaryDirectory() as workdir:
                 monkeypatch.chdir(workdir)
                 monkeypatch.setenv("HOME", str(home))
-                yield flake
+                yield TestFlake(flake_name, flake)
         else:
             monkeypatch.chdir(flake)
             monkeypatch.setenv("HOME", str(home))
-            yield flake
+            yield TestFlake(flake_name, flake)
 
 
 @pytest.fixture
-def test_flake(monkeypatch: pytest.MonkeyPatch) -> Iterator[Path]:
-    yield from create_flake(monkeypatch, "test_flake")
+def test_flake(monkeypatch: pytest.MonkeyPatch) -> Iterator[TestFlake]:
+    yield from create_flake(monkeypatch, FlakeName("test_flake"))
 
 
 @pytest.fixture
-def test_flake_with_core(monkeypatch: pytest.MonkeyPatch) -> Iterator[Path]:
+def test_flake_with_core(monkeypatch: pytest.MonkeyPatch) -> Iterator[TestFlake]:
     if not (CLAN_CORE / "flake.nix").exists():
         raise Exception(
             "clan-core flake not found. This test requires the clan-core flake to be present"
         )
-    yield from create_flake(monkeypatch, "test_flake_with_core", CLAN_CORE)
+    yield from create_flake(monkeypatch, FlakeName("test_flake_with_core"), CLAN_CORE)
 
 
 @pytest.fixture
-def test_flake_with_core_and_pass(monkeypatch: pytest.MonkeyPatch) -> Iterator[Path]:
+def test_flake_with_core_and_pass(
+    monkeypatch: pytest.MonkeyPatch,
+) -> Iterator[TestFlake]:
     if not (CLAN_CORE / "flake.nix").exists():
         raise Exception(
             "clan-core flake not found. This test requires the clan-core flake to be present"
         )
-    yield from create_flake(monkeypatch, "test_flake_with_core_and_pass", CLAN_CORE)
+    yield from create_flake(
+        monkeypatch, FlakeName("test_flake_with_core_and_pass"), CLAN_CORE
+    )

pkgs/clan-cli/tests/temporary_dir.py

@@ -1,3 +1,4 @@
+import os
 import tempfile
 from pathlib import Path
 from typing import Iterator
@@ -7,5 +8,11 @@ import pytest
 
 @pytest.fixture
 def temporary_dir() -> Iterator[Path]:
-    with tempfile.TemporaryDirectory(prefix="pytest-") as dirpath:
-        yield Path(dirpath)
+    if os.getenv("TEST_KEEP_TEMPORARY_DIR"):
+        temp_dir = tempfile.mkdtemp(prefix="pytest-")
+        path = Path(temp_dir)
+        yield path
+        print("=========> Keeping temporary directory: ", path)
+    else:
+        with tempfile.TemporaryDirectory(prefix="pytest-") as dirpath:
+            yield Path(dirpath)

pkgs/clan-cli/tests/test_clan_template.py

@@ -1,12 +0,0 @@
-from pathlib import Path
-
-import pytest
-from cli import Cli
-
-
-@pytest.mark.impure
-def test_template(monkeypatch: pytest.MonkeyPatch, temporary_dir: Path) -> None:
-    monkeypatch.chdir(temporary_dir)
-    cli = Cli()
-    cli.run(["create"])
-    assert (temporary_dir / ".clan-flake").exists()

pkgs/clan-cli/tests/test_create_flake.py

@@ -3,6 +3,7 @@ import subprocess
 from pathlib import Path
 
 import pytest
+from api import TestClient
 from cli import Cli
 
 
@@ -11,6 +12,25 @@ def cli() -> Cli:
     return Cli()
 
 
+@pytest.mark.impure
+def test_create_flake_api(
+    monkeypatch: pytest.MonkeyPatch, api: TestClient, temporary_dir: Path
+) -> None:
+    flake_dir = temporary_dir / "flake_dir"
+    flake_dir_str = str(flake_dir.resolve())
+    response = api.post(
+        "/api/flake/create",
+        json=dict(
+            dest=flake_dir_str,
+            url="git+https://git.clan.lol/clan/clan-core#new-clan",
+        ),
+    )
+
+    assert response.status_code == 201, f"Failed to create flake {response.text}"
+    assert (flake_dir / ".clan-flake").exists()
+    assert (flake_dir / "flake.nix").exists()
+
+
 @pytest.mark.impure
 def test_create_flake(
     monkeypatch: pytest.MonkeyPatch,
@@ -19,8 +39,11 @@ def test_create_flake(
     cli: Cli,
 ) -> None:
     monkeypatch.chdir(temporary_dir)
-    cli.run(["create"])
-    assert (temporary_dir / ".clan-flake").exists()
+    flake_dir = temporary_dir / "flake_dir"
+    flake_dir_str = str(flake_dir.resolve())
+    cli.run(["flake", "create", flake_dir_str])
+    assert (flake_dir / ".clan-flake").exists()
+    monkeypatch.chdir(flake_dir)
     cli.run(["machines", "create", "machine1"])
     capsys.readouterr()  # flush cache
     cli.run(["machines", "list"])

pkgs/clan-cli/tests/test_dirs.py

@@ -2,7 +2,7 @@ from pathlib import Path
 
 import pytest
 
-from clan_cli.dirs import get_clan_flake_toplevel
+from clan_cli.dirs import _get_clan_flake_toplevel
 from clan_cli.errors import ClanError
 
 
@@ -11,12 +11,12 @@ def test_get_clan_flake_toplevel(
 ) -> None:
     monkeypatch.chdir(temporary_dir)
     with pytest.raises(ClanError):
-        print(get_clan_flake_toplevel())
+        print(_get_clan_flake_toplevel())
     (temporary_dir / ".git").touch()
-    assert get_clan_flake_toplevel() == temporary_dir
+    assert _get_clan_flake_toplevel() == temporary_dir
 
     subdir = temporary_dir / "subdir"
     subdir.mkdir()
     monkeypatch.chdir(subdir)
     (subdir / ".clan-flake").touch()
-    assert get_clan_flake_toplevel() == subdir
+    assert _get_clan_flake_toplevel() == subdir

pkgs/clan-cli/tests/test_machines_config.py

@@ -1,8 +1,8 @@
-from pathlib import Path
+from fixtures_flakes import TestFlake
 
 from clan_cli.config import machine
 
 
-def test_schema_for_machine(test_flake: Path) -> None:
-    schema = machine.schema_for_machine("machine1", test_flake)
+def test_schema_for_machine(test_flake: TestFlake) -> None:
+    schema = machine.schema_for_machine(test_flake.name, "machine1")
     assert "properties" in schema

pkgs/clan-cli/tests/test_secrets_generate.py

@@ -1,8 +1,8 @@
-from pathlib import Path
 from typing import TYPE_CHECKING
 
 import pytest
 from cli import Cli
+from fixtures_flakes import TestFlake
 
 from clan_cli.machines.facts import machine_get_fact
 from clan_cli.secrets.folders import sops_secrets_folder
@@ -15,21 +15,27 @@ if TYPE_CHECKING:
 @pytest.mark.impure
 def test_generate_secret(
     monkeypatch: pytest.MonkeyPatch,
-    test_flake_with_core: Path,
+    test_flake_with_core: TestFlake,
     age_keys: list["KeyPair"],
 ) -> None:
-    monkeypatch.chdir(test_flake_with_core)
+    monkeypatch.chdir(test_flake_with_core.path)
     monkeypatch.setenv("SOPS_AGE_KEY", age_keys[0].privkey)
     cli = Cli()
     cli.run(["secrets", "users", "add", "user1", age_keys[0].pubkey])
     cli.run(["secrets", "generate", "vm1"])
-    has_secret("vm1-age.key")
-    has_secret("vm1-zerotier-identity-secret")
-    network_id = machine_get_fact("vm1", "zerotier-network-id")
+    has_secret(test_flake_with_core.name, "vm1-age.key")
+    has_secret(test_flake_with_core.name, "vm1-zerotier-identity-secret")
+    network_id = machine_get_fact(
+        test_flake_with_core.name, "vm1", "zerotier-network-id"
+    )
     assert len(network_id) == 16
-    age_key = sops_secrets_folder().joinpath("vm1-age.key").joinpath("secret")
+    age_key = (
+        sops_secrets_folder(test_flake_with_core.name)
+        .joinpath("vm1-age.key")
+        .joinpath("secret")
+    )
     identity_secret = (
-        sops_secrets_folder()
+        sops_secrets_folder(test_flake_with_core.name)
         .joinpath("vm1-zerotier-identity-secret")
         .joinpath("secret")
     )
@@ -42,7 +48,7 @@ def test_generate_secret(
     assert identity_secret.lstat().st_mtime_ns == secret1_mtime
 
     machine_path = (
-        sops_secrets_folder()
+        sops_secrets_folder(test_flake_with_core.name)
         .joinpath("vm1-zerotier-identity-secret")
         .joinpath("machines")
         .joinpath("vm1")

pkgs/clan-cli/tests/test_secrets_password_store.py

@@ -3,6 +3,7 @@ from pathlib import Path
 
 import pytest
 from cli import Cli
+from fixtures_flakes import TestFlake
 
 from clan_cli.machines.facts import machine_get_fact
 from clan_cli.nix import nix_shell
@@ -12,11 +13,11 @@ from clan_cli.ssh import HostGroup
 @pytest.mark.impure
 def test_upload_secret(
     monkeypatch: pytest.MonkeyPatch,
-    test_flake_with_core_and_pass: Path,
+    test_flake_with_core_and_pass: TestFlake,
     temporary_dir: Path,
     host_group: HostGroup,
 ) -> None:
-    monkeypatch.chdir(test_flake_with_core_and_pass)
+    monkeypatch.chdir(test_flake_with_core_and_pass.path)
     gnupghome = temporary_dir / "gpg"
     gnupghome.mkdir(mode=0o700)
     monkeypatch.setenv("GNUPGHOME", str(gnupghome))
@@ -39,7 +40,9 @@ def test_upload_secret(
     )
     subprocess.run(nix_shell(["pass"], ["pass", "init", "test@local"]), check=True)
     cli.run(["secrets", "generate", "vm1"])
-    network_id = machine_get_fact("vm1", "zerotier-network-id")
+    network_id = machine_get_fact(
+        test_flake_with_core_and_pass.name, "vm1", "zerotier-network-id"
+    )
     assert len(network_id) == 16
     identity_secret = (
         temporary_dir / "pass" / "machines" / "vm1" / "zerotier-identity-secret.gpg"
@@ -50,13 +53,13 @@ def test_upload_secret(
     cli.run(["secrets", "generate", "vm1"])
     assert identity_secret.lstat().st_mtime_ns == secret1_mtime
 
-    flake = test_flake_with_core_and_pass.joinpath("flake.nix")
+    flake = test_flake_with_core_and_pass.path.joinpath("flake.nix")
     host = host_group.hosts[0]
     addr = f"{host.user}@{host.host}:{host.port}?StrictHostKeyChecking=no&UserKnownHostsFile=/dev/null&IdentityFile={host.key}"
     new_text = flake.read_text().replace("__CLAN_DEPLOYMENT_ADDRESS__", addr)
     flake.write_text(new_text)
     cli.run(["secrets", "upload", "vm1"])
     zerotier_identity_secret = (
-        test_flake_with_core_and_pass / "secrets" / "zerotier-identity-secret"
+        test_flake_with_core_and_pass.path / "secrets" / "zerotier-identity-secret"
     )
     assert zerotier_identity_secret.exists()

pkgs/clan-cli/tests/test_vms_api.py

@@ -10,7 +10,8 @@ def test_inspect(api: TestClient, test_flake_with_core: Path) -> None:
         "/api/vms/inspect",
         json=dict(flake_url=str(test_flake_with_core), flake_attr="vm1"),
     )
-    assert response.status_code == 200, "Failed to inspect vm"
+
+    assert response.status_code == 200, f"Failed to inspect vm: {response.text}"
     config = response.json()["config"]
     assert config.get("flake_attr") == "vm1"
     assert config.get("cores") == 1
@@ -26,4 +27,4 @@ def test_incorrect_uuid(api: TestClient) -> None:
 
     for endpoint in uuid_endpoints:
         response = api.get(endpoint.format("1234"))
-        assert response.status_code == 422, "Failed to get vm status"
+        assert response.status_code == 422, f"Failed to get vm status: {response.text}"

pkgs/clan-cli/tests/test_vms_api_create.py

@@ -5,19 +5,21 @@ from typing import TYPE_CHECKING, Iterator
 import pytest
 from api import TestClient
 from cli import Cli
-from fixtures_flakes import create_flake
+from fixtures_flakes import TestFlake, create_flake
 from httpx import SyncByteStream
 from root import CLAN_CORE
 
+from clan_cli.flakes.types import FlakeName
+
 if TYPE_CHECKING:
     from age_keys import KeyPair
 
 
 @pytest.fixture
-def flake_with_vm_with_secrets(monkeypatch: pytest.MonkeyPatch) -> Iterator[Path]:
+def flake_with_vm_with_secrets(monkeypatch: pytest.MonkeyPatch) -> Iterator[TestFlake]:
     yield from create_flake(
         monkeypatch,
-        "test_flake_with_core_dynamic_machines",
+        FlakeName("test_flake_with_core_dynamic_machines"),
         CLAN_CORE,
         machines=["vm_with_secrets"],
     )
@@ -26,10 +28,10 @@ def flake_with_vm_with_secrets(monkeypatch: pytest.MonkeyPatch) -> Iterator[Path
 @pytest.fixture
 def remote_flake_with_vm_without_secrets(
     monkeypatch: pytest.MonkeyPatch,
-) -> Iterator[Path]:
+) -> Iterator[TestFlake]:
     yield from create_flake(
         monkeypatch,
-        "test_flake_with_core_dynamic_machines",
+        FlakeName("test_flake_with_core_dynamic_machines"),
         CLAN_CORE,
         machines=["vm_without_secrets"],
         remote=True,
@@ -74,8 +76,9 @@ def generic_create_vm_test(api: TestClient, flake: Path, vm: str) -> None:
         print(line.decode("utf-8"))
     print("=========END LOGS==========")
     assert response.status_code == 200, "Failed to get vm logs"
-
+    print("Get /api/vms/{uuid}/status")
     response = api.get(f"/api/vms/{uuid}/status")
+    print("Finished Get /api/vms/{uuid}/status")
     assert response.status_code == 200, "Failed to get vm status"
     data = response.json()
     assert (

pkgs/flake-module.nix

@@ -1,7 +1,7 @@
 { ... }: {
   imports = [
     ./clan-cli/flake-module.nix
-    ./installer/flake-module.nix
+
     ./ui/flake-module.nix
     ./theme/flake-module.nix
   ];
@@ -9,7 +9,7 @@
   perSystem = { pkgs, config, ... }: {
     packages = {
       tea-create-pr = pkgs.callPackage ./tea-create-pr { };
-      zerotier-members = pkgs.callPackage ./zerotier-members { };
+
       merge-after-ci = pkgs.callPackage ./merge-after-ci {
         inherit (config.packages) tea-create-pr;
       };

pkgs/go-ssb/default.nix

@@ -1,31 +0,0 @@
-{ lib
-, buildGoModule
-, fetchFromGitHub
-,
-}:
-buildGoModule rec {
-  pname = "go-ssb";
-  version = "0.2.1";
-
-  src = fetchFromGitHub {
-    owner = "ssbc";
-    repo = "go-ssb";
-    #rev = "v${version}";
-    rev = "d6db27d1852d5edff9c7e07d2a3419fe6b11a8db";
-    hash = "sha256-SewaIDNVrODWGxdvJjIg4oTdfGy8THNMlgv48KX8okE=";
-  };
-
-  vendorHash = "sha256-ZytuWFre7Cz6Qt01tLQoPEuNzDIyoC938OkdIrU8nZo=";
-
-  ldflags = [ "-s" "-w" ];
-
-  # take very long
-  doCheck = false;
-
-  meta = with lib; {
-    description = "Go implementation of ssb (work in progress)";
-    homepage = "https://github.com/ssbc/go-ssb";
-    license = licenses.mit;
-    maintainers = with maintainers; [ ];
-  };
-}

pkgs/installer/flake-module.nix

@@ -1,19 +0,0 @@
-{ self, lib, ... }:
-let
-  installer = lib.nixosSystem {
-    pkgs = self.inputs.nixpkgs.legacyPackages.x86_64-linux;
-    system = "x86_64-linux";
-    modules = [
-      self.nixosModules.installer
-      self.nixosModules.hidden-ssh-announce
-      self.inputs.nixos-generators.nixosModules.all-formats
-      self.inputs.disko.nixosModules.disko
-      ({ config, ... }: { system.stateVersion = config.system.nixos.version; })
-    ];
-  };
-in
-{
-  flake.packages.x86_64-linux.install-iso = self.inputs.disko.lib.makeDiskImages { nixosConfig = installer; };
-  flake.apps.x86_64-linux.install-vm.program = installer.config.formats.vm.outPath;
-  flake.apps.x86_64-linux.install-vm-nogui.program = installer.config.formats.vm-nogui.outPath;
-}

pkgs/theme/src/config.ts

@@ -20,29 +20,30 @@ export const config: PaletteConfig = {
      * Steps are defined in 'tones'
      */
     baseColors: {
+        neutral: {
+            keyColor: "#92898a",
+            tones: [2, 5, 8, 92, 95, 98],
+        },
         green: {
             keyColor: "#7AC51B",
-            tones: [98],
+            tones: [2, 98],
+        },
+        yellow: {
+            keyColor: "#E0E01F",
+            tones: [2, 98],
         },
         purple: {
             keyColor: "#661bc5",
-            tones: [],
-        },
-        neutral: {
-            keyColor: "#807788",
-            tones: [2, 5, 8, 98],
+            tones: [2, 98],
         },
+
         red: {
             keyColor: "#e82439",
             tones: [95],
         },
-        yellow: {
-            keyColor: "#E0E01F",
-            tones: [98],
-        },
         blue: {
             keyColor: "#1B7AC5",
-            tones: [95],
+            tones: [5, 95],
         },
     },
 

pkgs/ui/nix/ui-assets.nix

@@ -1,5 +1,5 @@
 { fetchzip }:
 fetchzip {
-  url = "https://git.clan.lol/api/packages/clan/generic/ui/044pm5casi89nrbzp06l2akn797cdjcj49yyf495fspqfya3kxvz/assets.tar.gz";
-  sha256 = "044pm5casi89nrbzp06l2akn797cdjcj49yyf495fspqfya3kxvz";
+  url = "https://git.clan.lol/api/packages/clan/generic/ui/1xk9if1sykv2kcv3zn0dxn7gd7hlqjbhzz6hrsw0yiksf03skg9r/assets.tar.gz";
+  sha256 = "1xk9if1sykv2kcv3zn0dxn7gd7hlqjbhzz6hrsw0yiksf03skg9r";
 }